RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ZMAT3Q9HA38 289 aaKnown RBP10.65□□□□□ -0.71
PTPRF-205ENST00000414879 UFSP2Q9NUQ7 469 aa10.65□□□□□ -0.71
PTPRF-205ENST00000414879 NDUFB3O43676 98 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 JTBO76095 146 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 PTGFRP43088 359 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 OR5M9Q8NGP3 310 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 CXXC4Q9H2H0 198 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 KIAA1456Q9P272 454 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 SHOXO15266 292 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 DXOO77932 396 aaKnown RBP10.64□□□□□ -0.71
PTPRF-205ENST00000414879 RPS27P42677 84 aaKnown RBP10.64□□□□□ -0.71
PTPRF-205ENST00000414879 LTC4SQ16873 150 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 PRSS45Q7RTY3 260 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 SUMF2Q8NBJ7 301 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 OR13C5Q8NGS8 318 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 RND1Q92730 232 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 RDH5Q92781 318 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 CTHRC1Q96CG8 243 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF75AQ96N20 296 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 C1QTNF6Q9BXI9 259 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 SHARPINQ9H0F6 387 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 KRBOX1C9JBD0 128 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 SIRPB1O00241 398 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 B3GALNT1O75752 331 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 OR8U8P0C7N1 319 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 CCL3P10147 92 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 NFYBP25208 207 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 RAB13P51153 203 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 MMP16P51512 607 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 KLF3P57682 345 aaPredicted RBP10.64□□□□□ -0.71
PTPRF-205ENST00000414879 AKR1C1Q04828 323 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 FMODQ06828 376 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 PRAMEF5Q5TYX0 476 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 PRAMEF6Q5VXH4 476 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 SHISA8B8ZZ34 492 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 WDR1O75083 606 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 PTP4A3O75365 173 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 CA11O75493 328 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 PPT1P50897 306 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 MICBQ29980 383 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 PLPPR5Q32ZL2 321 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 MESTQ5EB52 335 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 SPINK14Q6IE38 97 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 MALSU1Q96EH3 234 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 SEC22CQ9BRL7 303 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 SLC26A1Q9H2B4 701 aa10.64□□□□□ -0.71
PTPRF-205ENST00000414879 RER1O15258 196 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 TMEM52Q8NDY8 209 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 CA5BP1Q8WTZ4 195 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 RNF133Q8WVZ7 376 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 SLC52A3Q9NQ40 469 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 FSCN3Q9NQT6 498 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 GFOD1Q9NXC2 390 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 SPAARA0A1B0GVQ0 90 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 NPIPB13A6NJU9 1138 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 AHRRA9YTQ3 701 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 NPIPB4C9JG80 1138 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 E5RGE8 158 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 CTDSPLO15194 276 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 LALBAP00709 142 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 RAB7AP51149 207 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 OR10A3P58181 314 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 PPP1CBP62140 327 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 PHLDA2Q53GA4 152 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 BHLHA15Q7RTS1 189 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-205ENST00000414879 LYG2Q86SG7 212 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 OR10K1Q8NGX5 313 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 OR10X1Q8NGY0 326 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 APH1BQ8WW43 257 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 EXTL1Q92935 676 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 SLIRPQ9GZT3 109 aaKnown RBP10.63□□□□□ -0.71
PTPRF-205ENST00000414879 NSG2Q9Y328 171 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 GPR31O00270 319 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 MVDP53602 400 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 PRDX4Q13162 271 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 TMEM128Q5BJH2 165 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 PXDC1Q5TGL8 231 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF626Q68DY1 528 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF774Q6NX45 483 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 LINC00596Q86U02 117 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 VASH2Q86V25 355 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 ADAM19Q9H013 955 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 CA10Q9NS85 328 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 ING1Q9UK53 422 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-205ENST00000414879 DSPPQ9NZW4 1301 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 HIST1H1DP16402 221 aaKnown RBP10.63□□□□□ -0.71
PTPRF-205ENST00000414879 PCMT1P22061 227 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 RPS4Y1P22090 263 aaKnown RBP10.63□□□□□ -0.71
PTPRF-205ENST00000414879 FPR2P25090 351 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 FCGR2CP31995 323 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 B3GNTL1Q67FW5 361 aaPredicted RBP10.63□□□□□ -0.71
PTPRF-205ENST00000414879 RBMXL3Q8N7X1 1067 aaKnown RBP10.63□□□□□ -0.71
PTPRF-205ENST00000414879 PAQR8Q8TEZ7 354 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 RNF167Q9H6Y7 350 aa10.63□□□□□ -0.71
PTPRF-205ENST00000414879 HSD17B6O14756 317 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 PDCD6O75340 191 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 MBP02144 154 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 FUCA1P04066 466 aa10.62□□□□□ -0.71
PTPRF-205ENST00000414879 ZNF14P17017 642 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-205ENST00000414879 P2RY6Q15077 328 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms