RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 GYPAP02724 150 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 OR2T7P0C7T2 308 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 EPHA1P21709 976 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 PSMB10P40306 273 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 KCNJ8Q15842 424 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 DMRTC1Q5HYR2 192 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 LIPNQ5VXI9 398 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 ZNF841Q6ZN19 808 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 KCTD8Q6ZWB6 473 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 FAM90A1Q86YD7 464 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 PHC2Q8IXK0 858 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 ZDHHC23Q8IYP9 409 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 PQLC1Q8N2U9 271 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 YIPF7Q8N8F6 280 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 SEMA6DQ8NFY4 1073 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 OR10H4Q8NGA5 316 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 OR2T27Q8NH04 317 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 TRUB1Q8WWH5 349 aaKnown RBP12.35□□□□□ -0.43
LIMS4-201ENST00000413601 HPSE2Q8WWQ2 592 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 RPL3LQ92901 407 aaKnown RBP12.35□□□□□ -0.43
LIMS4-201ENST00000413601 RNF170Q96K19 258 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 C9orf16Q9BUW7 83 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 FGF23Q9GZV9 251 aaPredicted RBP12.35□□□□□ -0.43
LIMS4-201ENST00000413601 RNPEPL1Q9HAU8 725 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 ABCB9Q9NP78 766 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 CTSZQ9UBR2 303 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 CLN8Q9UBY8 286 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 OR52A1Q9UKL2 312 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 AUP1Q9Y679 476 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 R4GMQ9 66 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 TNFRSF13BO14836 293 aaPredicted RBP12.34□□□□□ -0.43
LIMS4-201ENST00000413601 ADAM20O43506 726 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 ENTPD6O75354 484 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 BAG2O95816 211 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 FSHBP01225 129 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 KRT8P05787 483 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 FAHP16930 419 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 SCGB2A2Q13296 93 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 TMED1Q13445 227 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 CEP78Q5JTW2 689 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 BCL2L15Q5TBC7 163 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 WDR25Q64LD2 544 aaPredicted RBP12.34□□□□□ -0.43
LIMS4-201ENST00000413601 ZBTB49Q6ZSB9 765 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 THAP5Q7Z6K1 395 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 ELMOD2Q8IZ81 293 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 SCCPDHQ8NBX0 429 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 RAB40AQ8WXH6 277 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 TECTBQ96PL2 329 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 HIST1H2AAQ96QV6 131 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 MRI1Q9BV20 369 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 TLNRD1Q9H1K6 362 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 TRIM36Q9NQ86 728 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 AASSQ9UDR5 926 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 PIGLQ9Y2B2 252 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 SNX5Q9Y5X3 404 aa12.34□□□□□ -0.43
LIMS4-201ENST00000413601 IGHV2-70DA0A0C4DH43 119 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 METTL15A6NJ78 407 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 TMEM210A6NLX4 147 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
LIMS4-201ENST00000413601 P2RY10O00398 339 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 NDUFA2O43678 99 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 DHRS3O75911 302 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 ATP6V1B1P15313 513 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 MTNR1AP48039 350 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 GPM6AP51674 278 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 GMFBP60983 142 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 SNRPGP62308 76 aaKnown RBP12.33□□□□□ -0.44
LIMS4-201ENST00000413601 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
LIMS4-201ENST00000413601 PAX8Q06710 450 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 RIPPLY1Q0D2K3 151 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 FAM76BQ5HYJ3 339 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 SLC25A30Q5SVS4 291 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 ZNF684Q5T5D7 378 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 TEX36Q5VZQ5 186 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 KRT74Q7RTS7 529 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 SPATA3Q8NHX4 192 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 DACT3Q96B18 629 aaPredicted RBP12.33□□□□□ -0.44
LIMS4-201ENST00000413601 SEH1LQ96EE3 360 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 MOB1AQ9H8S9 216 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 ERVK-18Q9QC07 812 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.33□□□□□ -0.44
LIMS4-201ENST00000413601 SLC22A13Q9Y226 551 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 GMPPBQ9Y5P6 360 aa12.33□□□□□ -0.44
LIMS4-201ENST00000413601 KIR2DS1A0A191URI9 304 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 A0A1B0GTI1 187 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 ZNF732B4DXR9 585 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 MTRF1O75570 445 aaKnown RBP12.32□□□□□ -0.44
LIMS4-201ENST00000413601 VENTXO95231 258 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 CFHR2P36980 270 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 NPY4RP50391 375 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 ZNF85Q03923 595 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 OCLNQ16625 522 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 MICBQ29980 383 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 ODF4Q2M2E3 257 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 CEACAM21Q3KPI0 293 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 ARMCX4Q5H9R4 360 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 ZBTB37Q5TC79 503 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 MEDAGQ5VYS4 303 aa12.32□□□□□ -0.44
LIMS4-201ENST00000413601 BTNL3Q6UXE8 466 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms