RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 NIPAL2Q9H841 368 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 AMBNQ9NP70 447 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 ZNF446Q9NWS9 450 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 PRODH2Q9UF12 536 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 WARS2Q9UGM6 360 aaKnown RBP4.54□□□□□ -1.68
NOD1-203ENST00000413433 RNF24Q9Y225 148 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 YARS2Q9Y2Z4 477 aaKnown RBP4.54□□□□□ -1.68
NOD1-203ENST00000413433 L3MBTL1Q9Y468 752 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 FAM215AQ9Y5M1 114 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 SCN3AQ9NY46 2000 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 PCNX1Q96RV3 2341 aa4.54□□□□□ -1.68
NOD1-203ENST00000413433 PRRC2AP48634 2157 aaKnown RBP4.53□□□□□ -1.68
NOD1-203ENST00000413433 A0A1B0GUS0 222 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 E9PLD3 99 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 SULT2B1O00204 365 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 SAP18O00422 153 aaKnown RBP4.53□□□□□ -1.68
NOD1-203ENST00000413433 AIM2O14862 343 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 POLR3GO15318 223 aaPredicted RBP4.53□□□□□ -1.68
NOD1-203ENST00000413433 GLSO94925 669 aaPredicted RBP4.53□□□□□ -1.68
NOD1-203ENST00000413433 ETHE1O95571 254 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 DUS4LO95620 317 aaKnown RBP4.53□□□□□ -1.68
NOD1-203ENST00000413433 NTN1O95631 604 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 TBX6O95947 436 aaPredicted RBP4.53□□□□□ -1.68
NOD1-203ENST00000413433 SERPINA6P08185 405 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 C1GALT1C1LP0DN25 315 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 MLNP12872 115 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 PGAM1P18669 254 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 LIM2P55344 173 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 RAB10P61026 200 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 SKP1P63208 163 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 STX4Q12846 297 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 TSNQ15631 228 aaKnown RBP4.53□□□□□ -1.68
NOD1-203ENST00000413433 KRTAP21-3Q3LHN1 58 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 ZFP69Q49AA0 526 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 SBSNQ6UWP8 590 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 HSDL2Q6YN16 418 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 DGAT2L6Q6ZPD8 337 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 PGAP1Q75T13 922 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 CDC20BQ86Y33 519 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 RNF175Q8N4F7 328 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 TRIML2Q8N7C3 387 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 WFDC11Q8NEX6 87 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 OR4K14Q8NGD5 310 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 LINC01560Q8TB33 94 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 MS4A6EQ96DS6 147 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 NODALQ96S42 347 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 ZDHHC11Q9H8X9 412 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 MTCH1Q9NZJ7 389 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 SPRR3Q9UBC9 169 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 CACNG5Q9UF02 275 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 SAMD4AQ9UPU9 718 aaKnown RBP4.53□□□□□ -1.68
NOD1-203ENST00000413433 KCNIP3Q9Y2W7 256 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 MTORP42345 2549 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 ITPR3Q14573 2671 aa4.53□□□□□ -1.68
NOD1-203ENST00000413433 NIPBLQ6KC79 2804 aaeCLIP4.52□□□□□ -1.69
NOD1-203ENST00000413433 CPAMD8Q8IZJ3 1885 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 IGLV4-3A0A075B6K6 122 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 TRGV5A0A0B4J1U4 118 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 B4DXG7 233 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 BCKDKO14874 412 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 EIF3HO15372 352 aaKnown RBP eCLIP4.52□□□□□ -1.69
NOD1-203ENST00000413433 HCN1O60741 890 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 CTNSO60931 367 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 IGLV2-11P01706 119 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 MBP02144 154 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 CRYGCP07315 174 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 HCKP08631 526 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 STAG3L2P0CL84 134 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 UMPSP11172 480 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 ZNF26P17031 533 aaPredicted RBP4.52□□□□□ -1.69
NOD1-203ENST00000413433 TUBG1P23258 451 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 STOMP27105 288 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 HTR1FP30939 366 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 AP1S2P56377 157 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 RAB38P57729 211 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 STXBP1P61764 594 aaKnown RBP4.52□□□□□ -1.69
NOD1-203ENST00000413433 LIPEQ05469 1076 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 CALCOCO2Q13137 446 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 MICAQ29983 383 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 SPANXN3Q5MJ09 141 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 SLC22A10Q63ZE4 541 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 EMBQ6PCB8 327 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 TMIGD1Q6UXZ0 262 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 RTL4Q6ZR62 310 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 SLC16A14Q7RTX9 510 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 SNX31Q8N9S9 440 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 DRAXINQ8NBI3 349 aaPredicted RBP4.52□□□□□ -1.69
NOD1-203ENST00000413433 OR4A4PQ8NGN8 299 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 ADAMTS16Q8TE57 1224 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 ZNF721Q8TF20 911 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 MITD1Q8WV92 249 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 UCN3Q969E3 161 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 ANKRD9Q96BM1 317 aaPredicted RBP4.52□□□□□ -1.69
NOD1-203ENST00000413433 ZBED6CLQ96FA7 236 aaPredicted RBP4.52□□□□□ -1.69
NOD1-203ENST00000413433 CERS2Q96G23 380 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 RMND5BQ96G75 393 aaPredicted RBP4.52□□□□□ -1.69
NOD1-203ENST00000413433 ATF6BQ99941 703 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 FOXC2Q99958 501 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 TM2D1Q9BX74 207 aa4.52□□□□□ -1.69
NOD1-203ENST00000413433 CAB39LQ9H9S4 337 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms