RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 TMED1Q13445 227 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 MICBQ29980 383 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 ZBTB37Q5TC79 503 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 LYPD2Q6UXB3 125 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 WDR82Q6UXN9 313 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 KCTD8Q6ZWB6 473 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 THAP5Q7Z6K1 395 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 WDR86Q86TI4 376 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 OR5P3Q8WZ94 311 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 PIGCQ92535 297 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 RFKQ969G6 155 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 PKP2Q99959 881 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 TTTY10Q9BZA0 68 aa13.08□□□□□ -0.32
MCF2L-211ENST00000413354 KIR2DS1A0A191URI9 304 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 LOC110117498-PIK3R3F6TDL0 507 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 GYPAP02724 150 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 CSNK2BP67870 215 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 RIPPLY1Q0D2K3 151 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 RBMS3Q6XE24 437 aaKnown RBP13.07□□□□□ -0.32
MCF2L-211ENST00000413354 ZNF841Q6ZN19 808 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 KRT74Q7RTS7 529 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 FAM90A1Q86YD7 464 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 OR51G2Q8NGK0 314 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 OR10Z1Q8NGY1 313 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 DACT3Q96B18 629 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-211ENST00000413354 UPRTQ96BW1 309 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 C12orf43Q96C57 262 aaKnown RBP13.07□□□□□ -0.32
MCF2L-211ENST00000413354 GPR84Q9NQS5 396 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 IMPAD1Q9NX62 359 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 USE1Q9NZ43 259 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 CTSZQ9UBR2 303 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 R4GMQ9 66 aa13.07□□□□□ -0.32
MCF2L-211ENST00000413354 PRR32B1ATL7 298 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 SRRM5B3KS81 715 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 DHRS3O75911 302 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 RGS9O75916 674 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-211ENST00000413354 IGLV3-1P01715 115 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 ALPLP05186 524 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 KRT8P05787 483 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 LIPFP07098 398 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 OR2T7P0C7T2 308 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 EGR1P18146 543 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 ATP6V1E1P36543 226 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 BCL2L15Q5TBC7 163 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 SLC36A1Q7Z2H8 476 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 OR2T27Q8NH04 317 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 OR51E1Q8TCB6 317 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 HPSE2Q8WWQ2 592 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 RNF170Q96K19 258 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 FAM71F1Q96KD3 344 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-211ENST00000413354 RAB3IPQ96QF0 476 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-211ENST00000413354 ENPP5Q9UJA9 477 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 GTF2A1LQ9UNN4 478 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 SNX5Q9Y5X3 404 aa13.06□□□□□ -0.32
MCF2L-211ENST00000413354 OR5B21A6NL26 309 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 C22orf46C9J442 243 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 H3BNX3 289 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 EI24O14681 340 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 CDIPTO14735 213 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 TNFRSF13BO14836 293 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 TMPRSS2O15393 492 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 ECDO95905 644 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 POLR2IP36954 125 aaKnown RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 ALDH3A2P51648 485 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 GNG3P63215 75 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 HOXA4Q00056 320 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 MFGE8Q08431 387 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 FAM76BQ5HYJ3 339 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 KLF17Q5JT82 389 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 PNLDC1Q8NA58 520 aaKnown RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 FAM216AQ8WUB2 273 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 TRUB1Q8WWH5 349 aaKnown RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 APOL4Q9BPW4 351 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 MS4A7Q9GZW8 240 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 ZMAT3Q9HA38 289 aaKnown RBP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 DNAJB11Q9UBS4 358 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 OR52A1Q9UKL2 312 aa13.05□□□□□ -0.32
MCF2L-211ENST00000413354 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.05□□□□□ -0.32
MCF2L-211ENST00000413354 IGHV3OR15-7A0A075B7D8 119 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 TRAV40A0A0B4J280 105 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 NKX6-3A6NJ46 265 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 DHRS7CA6NNS2 312 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 SRSF10O75494 262 aaKnown RBP13.04□□□□□ -0.32
MCF2L-211ENST00000413354 SULT1C4O75897 302 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 TTRP02766 147 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 MTNR1AP48039 350 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 GPM6AP51674 278 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 ACTG1P63261 375 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 CEACAM21Q3KPI0 293 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 PLCXD3Q63HM9 321 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 DOK3Q7L591 496 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 ELMOD2Q8IZ81 293 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-211ENST00000413354 YIPF7Q8N8F6 280 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
MCF2L-211ENST00000413354 OR10H4Q8NGA5 316 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms