RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 PTH2Q96A98 100 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 MRAP2Q96G30 205 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 RNF185Q96GF1 192 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 CCDC42Q96M95 316 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 Q96MT0 163 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 RDH12Q96NR8 316 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 SLC19A3Q9BZV2 496 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 TOLLIPQ9H0E2 274 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 DHX35Q9H5Z1 703 aaKnown RBP3.37□□□□□ -1.87
BRCA1-204ENST00000412061 MYOZ1Q9NP98 299 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-204ENST00000412061 SLCO1B3Q9NPD5 702 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 CCL28Q9NRJ3 127 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 TMEM100Q9NV29 134 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 TAS2R13Q9NYV9 303 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 ANXA10Q9UJ72 324 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 SLC7A11Q9UPY5 501 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 MOKQ9UQ07 419 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 SIGLEC9Q9Y336 463 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 RAB3GAP2Q9H2M9 1393 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 A0A1W2PRG6 482 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 OR2AT4A6NND4 320 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 F5H5T6 163 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 M0R036 132 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 BIRC5O15392 142 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 MAGEB4O15481 346 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 SEMA3DO95025 777 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 RLN2P04090 185 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 IGHV3-43DP0DP04 118 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 CD1EP15812 388 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 UGT2B7P16662 529 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 RCC1P18754 421 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 F8A1P23610 371 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 GDF1P27539 372 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 RPS9P46781 194 aaKnown RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 PSMD7P51665 324 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 NDUFA8P51970 172 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 DLX6P56179 175 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 MRPS25P82663 173 aaKnown RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 GLO1Q04760 184 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 SGCAQ16586 387 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF630Q2M218 657 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 CHRFAM7AQ494W8 412 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 LRRC10Q5BKY1 277 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF343Q6P1L6 599 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 SLC25A42Q86VD7 318 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 WDFY1Q8IWB7 410 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 ZFP82Q8N141 532 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 FAM71E2Q8N5Q1 922 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 C19orf18Q8NEA5 215 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 OR11H7Q8NGC8 314 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 NT5CQ8TCD5 201 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 RNF138Q8WVD3 245 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 FAM151AQ8WW52 585 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 HAUS1Q96CS2 278 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 AURKBQ96GD4 344 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 SIGLEC12Q96PQ1 595 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 SMIM14Q96QK8 99 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 SELENOSQ9BQE4 189 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 MRPS26Q9BYN8 205 aaKnown RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 ARL6Q9H0F7 186 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 GNB4Q9HAV0 340 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 EXOSC4Q9NPD3 245 aaKnown RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 MED4Q9NPJ6 270 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 C12orf4Q9NQ89 552 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 RRAGDQ9NQL2 400 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-204ENST00000412061 MARCH5Q9NX47 278 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 BABAM2Q9NXR7 383 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 IL17CQ9P0M4 197 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 CD84Q9UIB8 345 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 VAX2Q9UIW0 290 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 GUCA1BQ9UMX6 200 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 TMEM131Q92545 1883 aa3.36□□□□□ -1.87
BRCA1-204ENST00000412061 C2orf16Q68DN1 1984 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 TTC21AQ8NDW8 1320 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 KRTAP16-1A8MUX0 517 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 J3QT63 122 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 UBDO15205 165 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 TGOLN2O43493 480 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF189O75820 626 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-204ENST00000412061 TNFSF13O75888 250 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 KLF8O95600 359 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-204ENST00000412061 SLC25A27O95847 323 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 IGKV1D-16P01601 117 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 GIPP09681 153 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-204ENST00000412061 CELP19835 753 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 FUT3P21217 361 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 CCNE1P24864 410 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 HTR1DP28221 377 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 HSD11B1P28845 292 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 P2RX1P51575 399 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 NUP107P57740 925 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 PRR3P79522 188 aaKnown RBP3.35□□□□□ -1.87
BRCA1-204ENST00000412061 CDC20Q12834 499 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 CASP8Q14790 479 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 TBC1D28Q2M2D7 210 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 TIMM50Q3ZCQ8 353 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 PAMR1Q6UXH9 720 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 CASP12Q6UXS9 341 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF493Q6ZR52 646 aa3.35□□□□□ -1.87
BRCA1-204ENST00000412061 CCDC54Q8NEL0 328 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms