RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TMEM41AQ96HV5 264 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PKNOX2Q96KN3 472 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SGCZQ96LD1 299 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 C7orf26Q96N11 449 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PRPF18Q99633 342 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 INPP5KQ9BT40 448 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 TM2D1Q9BX74 207 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC2A11Q9BYW1 496 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 RHOBTB2Q9BYZ6 727 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NAT10Q9H0A0 1025 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 NSRP1Q9H0G5 558 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR10A4Q9H209 315 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 RHBGQ9H310 441 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 HEATR1Q9H583 2144 aaKnown RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 FN3KRPQ9HA64 309 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 IFT46Q9NQC8 304 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PCDHB16Q9NRJ7 776 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNF277Q9NRM2 450 aaPredicted RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PSD3Q9NYI0 1048 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 POLKQ9UBT6 870 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 DAPK2Q9UIK4 370 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 UBE2J1Q9Y385 318 aaPredicted RBP-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 PAPPAQ13219 1627 aa-2.25□□□□□ -2.77
RNU4-88P-201ENST00000411220 KIF13AQ9H1H9 1805 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 TRAV23DV6A0A075B6W5 121 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 GVQW2A0A096LPI5 108 aaPredicted RBP-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 IGHV1-58A0A0C4DH39 117 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 CIB4A0PJX0 185 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ARHGEF37A1IGU5 675 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 LRIT2A6NDA9 550 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 PLEKHD1A6NEE1 506 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 C11orf86A6NJI1 115 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 E7EVH7 732 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 RNASEK-C17orf49H0YIS7 233 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 GOLGA6L19H0YKK7 550 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 H3BNH8 94 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 H7C4K7 107 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZBTB43O43298 467 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 CHMP2AO43633 222 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 SULT1B1O43704 296 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 TYROBPO43914 113 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR1I1O60431 355 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 KPNA6O60684 536 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR2J3O76001 311 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ABHD2P08910 425 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 CNPP09543 421 aaKnown RBP-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 PABPC4LP0CB38 370 aaKnown RBP-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 MPC1LP0DKB6 136 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 PFKFB1P16118 471 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 IL7RP16871 459 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 LBPP18428 481 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 F8A1P23610 371 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 HTR2CP28335 458 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 CHI3L1P36222 383 aaPredicted RBP-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 AQP2P41181 271 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 CDKN1BP46527 198 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 STAT2P52630 851 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 CDKN2DP55273 166 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 SELENOTP62341 195 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 HSF2Q03933 536 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 IL24Q13007 206 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 IRF3Q14653 427 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 KCNJ11Q14654 390 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNHIT3Q15649 155 aaPredicted RBP-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 HLA-DRB5Q30154 266 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM31Q5JXX7 168 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 C1orf100Q5SVJ3 147 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 C9orf135Q5VTT2 229 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ADALQ6DHV7 355 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR4A47Q6IF82 309 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 C1orf122Q6ZSJ8 110 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ACOT7LQ6ZUV0 252 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 LHFPL2Q6ZUX7 228 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 CAMKMTQ7Z624 323 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 YRDCQ86U90 279 aaKnown RBP-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 TBC1D26Q86UD7 250 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 C11orf74Q86VG3 221 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 GPHB5Q86YW7 130 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 LINC00311Q8N616 119 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ABCF1Q8NE71 845 aaKnown RBP eCLIP-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR11H4Q8NGC9 324 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR9G4Q8NGQ1 327 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR2G3Q8NGZ4 309 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ATL2Q8NHH9 583 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 KCNG3Q8TAE7 436 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 TTC8Q8TAM2 541 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 C2CD4CQ8TF44 421 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 DDI1Q8WTU0 396 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 TMEM239Q8WW34 195 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAHD2AQ96GK7 314 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ACY3Q96HD9 319 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 APOPT1Q96IL0 206 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 RDH12Q96NR8 316 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 TSSK3Q96PN8 268 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 TAAR9Q96RI9 348 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 RASL10BQ96S79 203 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 ABHD6Q9BV23 337 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 SIL1Q9H173 461 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 WFDC10AQ9H1F0 79 aa-2.26□□□□□ -2.77
RNU4-88P-201ENST00000411220 C11orf49Q9H6J7 331 aa-2.26□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms