RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 SAV1Q9H4B6 383 aaPredicted RBP3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 FGF22Q9HCT0 170 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 PARP11Q9NR21 331 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 UQCC1Q9NVA1 299 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 ASF1BQ9NVP2 202 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 RCC2Q9P258 522 aaKnown RBP3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 CTSFQ9UBX1 484 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 KCNG2Q9UJ96 466 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 GTF2A1LQ9UNN4 478 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 KLHDC2Q9Y2U9 406 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 MMACHCQ9Y4U1 282 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 KPTNQ9Y664 436 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 C2orf16Q68DN1 1984 aa3.11□□□□□ -1.91
RNU6-55P-201ENST00000411092 DOCK9Q9BZ29 2069 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 IGLV1-36A0A0B4J1U3 117 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 A0A1B0GW64 132 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 LOC107986453A0A1B0GWG9 222 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 A8MVM7 634 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ZNF705EA8MWA4 302 aaPredicted RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 C1orf196B1AJZ1 125 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 IDSB3KWA1 339 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 H0YIG0 161 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 RAB27BO00194 218 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 WRBO00258 174 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 GPR31O00270 319 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 UBE2CO00762 179 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 TO15178 435 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 YKT6O15498 198 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 NUPL2O15504 423 aaKnown RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 LATO43561 262 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 SPRY2O43597 315 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 GATCO43716 136 aaKnown RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 FADS1O60427 444 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 NPIPB7O75200 414 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 SRSF10O75494 262 aaKnown RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 TUSC2O75896 110 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 OR6A2O95222 327 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 UTS2O95399 124 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 SFT2D2O95562 160 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ACTL6AO96019 429 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 CST4P01036 141 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 BGLAPP02818 100 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 MT-ND4LP03901 98 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 CD5P06127 495 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 DCNP07585 359 aaKnown RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 CT45A8P0DMV1 189 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 CT45A9P0DMV2 189 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 PTHLHP12272 177 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 NR2C1P13056 603 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 GP1BBP13224 206 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ADCYAP1P18509 176 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 PGCP20142 388 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 HNRNPA2B1P22626 353 aaKnown RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 CXCR1P25024 350 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 PTAFRP25105 342 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 S100PP25815 95 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ACTR1BP42025 376 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 CSNK1EP49674 416 aaKnown RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 RAB5CP51148 216 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 AKR1D1P51857 326 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 POLR2HP52434 150 aaKnown RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 SUCLG1P53597 346 aaKnown RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ATP1B3P54709 279 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 DVL1P1P54792 670 aaPredicted RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 SUMO3P55854 103 aaPredicted RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 TIRAPP58753 221 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 LINC00205P59089 165 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 KRTAP10-7P60409 375 aaPredicted RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ACTR1AP61163 376 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ID2Q02363 134 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ECH1Q13011 328 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 RHEBQ15382 184 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 MEP1BQ16820 701 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 CT45A2Q5DJT8 189 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 FAM74A1Q5RGS3 127 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 STPG1Q5TH74 334 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 FAM109BQ6ICB4 259 aaPredicted RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 PSRC1Q6PGN9 363 aaPredicted RBP3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 HIST2H3AQ71DI3 136 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 Q7L0L9 218 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 MDGA2Q7Z553 956 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 TRAPPC6BQ86SZ2 158 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 NAA40Q86UY6 237 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 FJX1Q86VR8 437 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ANGPTL5Q86XS5 388 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 LYPD6Q86Y78 171 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 YAF2Q8IY57 180 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ZNF561Q8N587 486 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 JAGN1Q8N5M9 183 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ZNF615Q8N8J6 731 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 ZNF248Q8NDW4 579 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 CCDC54Q8NEL0 328 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 LFNGQ8NES3 379 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 OR51A4Q8NGJ6 313 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 OR5D14Q8NGL3 314 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 OR13C3Q8NGS6 347 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 OR8S1Q8NH09 359 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 OR8K3Q8NH51 312 aa3.1□□□□□ -1.91
RNU6-55P-201ENST00000411092 OR10G6Q8NH81 332 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms