RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PPIAL4FP0DN26 164 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF19P17023 458 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 MYL12AP19105 171 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 CCL1P22362 96 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 CPT2P23786 658 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 DCKP27707 260 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM244Q5VVB8 128 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 KCTD8Q6ZWB6 473 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 KRT74Q7RTS7 529 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 GLCCI1Q86VQ1 547 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 LRRC28Q86X40 367 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-205ENST00000409810 OR1M1Q8NGA1 313 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 OR52I1Q8NGK6 324 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 OR51F2Q8NH61 342 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 C4orf36Q96KX1 117 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 SOX7Q9BT81 388 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 JAM3Q9BX67 310 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 FGF20Q9NP95 211 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM160Q9NX00 188 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 DCAF16Q9NXF7 216 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 SLC22A13Q9Y226 551 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 MYRFQ9Y2G1 1151 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 PPIAL4AQ9Y536 164 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 V9GYS6 101 aa9.18□□□□□ -0.94
CHMP3-205ENST00000409810 FN1P02751 2386 aaKnown RBP9.17□□□□□ -0.94
CHMP3-205ENST00000409810 OR5B21A6NL26 309 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 INAFM1C9JVW0 142 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 FOXH1O75593 365 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 MSMBP08118 114 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 CCDC159P0C7I6 412 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 HNF1AP20823 631 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 PSMB10P40306 273 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 HSPA13P48723 471 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 DVL1P1P54792 670 aaPredicted RBP9.17□□□□□ -0.94
CHMP3-205ENST00000409810 AQP4P55087 323 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 OR12D2P58182 307 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 LMO4P61968 165 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 GNG3P63215 75 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF154Q13106 437 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 ZMYND11Q15326 602 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 MPPED2Q15777 294 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 ODF4Q2M2E3 257 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 WDR38Q5JTN6 314 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 PLCXD3Q63HM9 321 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 FDX2Q6P4F2 183 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 TMPRSS11AQ6ZMR5 421 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 Q6ZSR3 168 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 NLRC3Q7RTR2 1065 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 LHFPL3Q86UP9 236 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 OR2G2Q8NGZ5 317 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 OR5P3Q8WZ94 311 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 TFAP2CQ92754 450 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 PPP1R14AQ96A00 147 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 C10orf35Q96D05 121 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 RNF170Q96K19 258 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 TECTBQ96PL2 329 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 PATZ1Q9HBE1 687 aaKnown RBP9.17□□□□□ -0.94
CHMP3-205ENST00000409810 C1orf123Q9NWV4 160 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 CHCHD3Q9NX63 227 aaKnown RBP9.17□□□□□ -0.94
CHMP3-205ENST00000409810 ERVK13-1Q9NX77 482 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 LPAR3Q9UBY5 353 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 MIOXQ9UGB7 285 aa9.17□□□□□ -0.94
CHMP3-205ENST00000409810 EXOSC1Q9Y3B2 195 aaKnown RBP9.17□□□□□ -0.94
CHMP3-205ENST00000409810 TRAV38-1A0A0B4J264 116 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 TRAV20A0A0B4J274 112 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 EFCAB10A6NFE3 127 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 FAM157AC9JC47 383 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 GATBO75879 557 aaKnown RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 SERPINA3P01011 423 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 NRASP01111 189 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 PIPP12273 146 aaPredicted RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 RPS2P15880 293 aaKnown RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 FAHP16930 419 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 PMELP40967 661 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 GPM6AP51674 278 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 CCR9P51686 369 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 GBX2P52951 348 aaPredicted RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 RIPK1Q13546 671 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 ALKBH1Q13686 389 aaKnown RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 SMN1Q16637 294 aaKnown RBP9.16□□□□□ -0.94
CHMP3-205ENST00000409810 CEACAM21Q3KPI0 293 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 ZNF404Q494X3 552 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 ESCO2Q56NI9 601 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 CEP78Q5JTW2 689 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 CLVS2Q5SYC1 327 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 DCDC5Q6ZRR9 648 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 MOB3CQ70IA8 216 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 PRSS35Q8N3Z0 413 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 OR8B3Q8NGG8 313 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 OR5A2Q8NGI9 324 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 OR10Z1Q8NGY1 313 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 OR14K1Q8NGZ2 314 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 NRG4Q8WWG1 115 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 HPSE2Q8WWQ2 592 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM186Q96B77 213 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 PELI1Q96FA3 418 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 TMEM80Q96HE8 168 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 OR8B2Q96RD0 313 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 COMMD4Q9H0A8 199 aa9.16□□□□□ -0.94
CHMP3-205ENST00000409810 TLNRD1Q9H1K6 362 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms