RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 POU2F1P14859 743 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ACADSP16219 412 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ZNF708P17019 499 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 FUT1P19526 365 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 PTNP21246 168 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 CXCR1P25024 350 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 FKBP2P26885 142 aaKnown RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 GDF1P27539 372 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 DUTP33316 252 aaKnown RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 CAPGP40121 348 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 MAGEA5P43359 124 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 RPS5P46782 204 aaKnown RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 NPY4RP50391 375 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 P2RY4P51582 365 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 CRISP1P54107 249 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 CLDN18P56856 261 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ESRRGP62508 458 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 H3F3AP84243 136 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 CDK5Q00535 292 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 NPRL3Q12980 569 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 IL18R1Q13478 541 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 PTGES3Q15185 160 aaKnown RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 INAQ16352 499 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 SGCBQ16585 318 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ANKDD1AQ495B1 522 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 C6orf52Q5T4I8 152 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ZNF691Q5VV52 312 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 C1orf140Q5VVS0 124 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 RAET1LQ5VY80 246 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 SLX4IPQ5VYV7 408 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 TTC23Q5W5X9 447 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 C12orf73Q69YU5 71 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 RPL13AP3Q6NVV1 102 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 C3orf33Q6P1S2 294 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 NHLRC1Q6VVB1 395 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 Q6ZPB1 254 aaPredicted RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 TMPPEQ6ZT21 453 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 CHMP1BQ7LBR1 199 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 FAM122BQ7Z309 247 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 YRDCQ86U90 279 aaKnown RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 SLC22A16Q86VW1 577 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 SIAH3Q8IW03 269 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 FAM219AQ8IW50 185 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 PHC2Q8IXK0 858 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 DHRSXQ8N5I4 330 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 LRRC17Q8N6Y2 441 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 Q8NFD4 153 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 OR8D4Q8NGM9 314 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 OR13C2Q8NGS9 318 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 OR4Q3Q8NH05 313 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 DDIT4LQ96D03 193 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 DTNBP1Q96EV8 351 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 JSRP1Q96MG2 331 aaPredicted RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 GPX7Q96SL4 187 aaPredicted RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 ANKRD60Q9BZ19 345 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 UCK2Q9BZX2 261 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 OR11A1Q9GZK7 315 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ADNPQ9H2P0 1102 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 OR52D1Q9H346 318 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 RIMS4Q9H426 269 aaPredicted RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 SLC25A19Q9HC21 320 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 MCCC2Q9HCC0 563 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 B3GAT2Q9NPZ5 323 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 MRPL39Q9NYK5 338 aaKnown RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 B4GALT7Q9UBV7 327 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ENOPH1Q9UHY7 261 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ZNF229Q9UJW7 825 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 DKKL1Q9UK85 242 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 TRAPPC4Q9Y296 219 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 TP53TG5Q9Y2B4 290 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 RPH3AQ9Y2J0 694 aaPredicted RBP3.47□□□□□ -1.85
CLK1-203ENST00000409769 HDGFL3Q9Y3E1 203 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ZNF337Q9Y3M9 751 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 CDH10Q9Y6N8 788 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 HSPE1-MOB4S4R3N1 261 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 ATRXP46100 2492 aa3.47□□□□□ -1.85
CLK1-203ENST00000409769 SPTA1P02549 2419 aa3.46□□□□□ -1.85
CLK1-203ENST00000409769 POLEQ07864 2286 aa3.46□□□□□ -1.85
CLK1-203ENST00000409769 CACNA1CQ13936 2221 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 CACNA1BQ00975 2339 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TRAV27A0A087WT01 109 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 A0A0J9YW62 118 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 LOC102725191A0A1B0GVB3 256 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 A0A1W2PNV4 684 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TRIM64A6NGJ6 449 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 C5orf52A6NGY3 159 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 GJE1A6NN92 205 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 FAM166BA8MTA8 275 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 NPIPA3F8WFD2 350 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PLPP3O14495 311 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 BCKDKO14874 412 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 ARPC3O15145 178 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 TLX2O43763 284 aaPredicted RBP3.46□□□□□ -1.86
CLK1-203ENST00000409769 HCN1O60741 890 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 PRAF2O60831 178 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 SAP30O75446 220 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 WBP4O75554 376 aaKnown RBP3.46□□□□□ -1.86
CLK1-203ENST00000409769 TRAPPC6AO75865 159 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 NXPH4O95158 308 aa3.46□□□□□ -1.86
CLK1-203ENST00000409769 NDUFB2O95178 105 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms