RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ELFN2Q5R3F8 820 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 PRSS41Q7RTY9 318 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SLC38A9Q8NBW4 561 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 SLC25A43Q8WUT9 341 aaPredicted RBP7.57□□□□□ -1.2
SCN9A-203ENST00000409672 OR2M2Q96R28 347 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 PRSS44E7EML9 344 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 PAPLNO95428 1278 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 LIPAP38571 399 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 TAS2R45P59539 299 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 HTR4Q13639 388 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 PWWP2BQ6NUJ5 590 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 OR10D3Q8NH80 312 aa7.57□□□□□ -1.2
SCN9A-203ENST00000409672 BCL2L2Q92843 193 aaPredicted RBP7.57□□□□□ -1.2
SCN9A-203ENST00000409672 HPP00738 406 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 SBK3P0C264 359 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 SDHAP31040 664 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 CD200P41217 278 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ETV1P50549 477 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 KRTDAPP60985 99 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 SSPNQ14714 243 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 Q3ZCU0 254 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 FNDC7Q5VTL7 733 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 OSR2Q8N2R0 312 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 LRRC29Q8WV35 223 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 NEURL3Q96EH8 262 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 PERPQ96FX8 193 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 OR2C1O95371 312 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 DLX5P56178 289 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 SHBQ15464 509 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 C2CD4CQ8TF44 421 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 A4GALTQ9NPC4 353 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 TMEM140Q9NV12 185 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 PF4P02776 101 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ELK1P19419 428 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ACER2Q5QJU3 275 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 OR6K3Q8NGY3 331 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 SLC39A13Q96H72 371 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 SAP30LQ9HAJ7 183 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 TOGARAM1Q9Y4F4 1720 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 LMO7DNF2Z398 122 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 IGKV3-20P01619 116 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ACOT6Q3I5F7 207 aaPredicted RBP7.56□□□□□ -1.2
SCN9A-203ENST00000409672 GGNBP1Q5YKI7 109 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 HAVCR2Q8TDQ0 301 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ISG20L2Q9H9L3 353 aaKnown RBP7.56□□□□□ -1.2
SCN9A-203ENST00000409672 DLL4Q9NR61 685 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 RFX2P48378 723 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 DUSP8Q13202 625 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 PRSS35Q8N3Z0 413 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF441Q8N8Z8 693 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 RAB1CQ92928 201 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 EMCNQ9ULC0 261 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 HMGN4O00479 90 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 TMPRSS11DO60235 418 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ITGBL1O95965 494 aaPredicted RBP7.56□□□□□ -1.2
SCN9A-203ENST00000409672 C21orf58P58505 322 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 CXorf58Q96LI9 332 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 FIZ1Q96SL8 496 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 RNF2Q99496 336 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 FOXB1Q99853 325 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 RYDENQ9NUL5 291 aaKnown RBP7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF774Q6NX45 483 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 PSD2Q9BQI7 771 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 UBQLN3Q9H347 655 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 ADAM29Q9UKF5 820 aa7.56□□□□□ -1.2
SCN9A-203ENST00000409672 TNFRSF10CO14798 259 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 UBE2L6O14933 153 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 MMP11P24347 488 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 CCR5P51681 352 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 RPS4XP62701 263 aaKnown RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 FLYWCH2Q96CP2 140 aaKnown RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 C14orf79Q96F83 325 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 SLCO1C1Q9NYB5 712 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 TNFSF14O43557 240 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 CST7O76096 145 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 CASP3P42574 277 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 ID4P47928 161 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 PCK2Q16822 640 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 VMA21Q3ZAQ7 101 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 DDOQ99489 341 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 MED17Q9NVC6 651 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 YLPM1P49750 1951 aaKnown RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 TARM1B6A8C7 271 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 CHRM2P08172 466 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 LIMK1P53667 647 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 LURAP1Q96LR2 239 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 WASHC3Q9Y3C0 194 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 KNDC1Q76NI1 1749 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 PRSS37A4D1T9 235 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 EIF4E2O60573 245 aaKnown RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 NEURL1O76050 574 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 AKR1C3P42330 323 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 FADS6Q8N9I5 356 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 OR52L2PQ8NGH6 319 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 GABARAPL1Q9H0R8 117 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 DOCK7Q96N67 2140 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 FCMRO60667 390 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 H2AFB1P0C5Y9 115 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 GPR3P46089 330 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms