RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 S100A2P29034 98 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 CRABP1P29762 137 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 FCGR2CP31995 323 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 LYSMD4Q5XG99 296 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 DCXRQ7Z4W1 244 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-205ENST00000409455 CD300LFQ8TDQ1 290 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 MESP1Q9BRJ9 268 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 NICN1Q9BSH3 213 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 TXNIPQ9H3M7 391 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 PTGES2Q9H7Z7 377 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 PRTFDC1Q9NRG1 225 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 PRODH2Q9UF12 536 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 AMDHD2Q9Y303 409 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 DMDP11532 3685 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 IGHV5-51A0A0C4DH38 117 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 NME2P1O60361 137 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 MPZL1O95297 269 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 KLK3P07288 261 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-205ENST00000409455 GIMD1P0DJR0 217 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 GPX4P36969 197 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-205ENST00000409455 TMEM33P57088 247 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 RAB1AP62820 205 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 FUT7Q11130 342 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 C1QL3Q5VWW1 255 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 PPP1R3BQ86XI6 285 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 OIT3Q8WWZ8 545 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 TCTN2Q96GX1 697 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 KCNJ16Q9NPI9 418 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 FBLN5Q9UBX5 448 aa13.67□□□□□ -0.22
LIMS2-205ENST00000409455 COA3Q9Y2R0 106 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-205ENST00000409455 CLDN4O14493 209 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 UTS2O95399 124 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 MT-ATP6P00846 226 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF708P17019 499 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 SLC6A8P48029 635 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 P2RY4P51582 365 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 KIAA0141Q14154 515 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-205ENST00000409455 ARHGEF39Q8N4T4 335 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 CNTNAP3Q9BZ76 1288 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 SMIM3Q9BZL3 60 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 NRSN2Q9GZP1 204 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 LUZP4Q9P127 313 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 ANAPC10Q9UM13 185 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 FREM3P0C091 2139 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 LOC101059948A0A1B0GTJ6 334 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 FIGNL2A6NMB9 653 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 TMEM14DPA8MWL7 114 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 HIST1H1DP16402 221 aaKnown RBP13.66□□□□□ -0.22
LIMS2-205ENST00000409455 HOXA5P20719 270 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 OR3A2P47893 321 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 OR1D5P58170 312 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 ERV3-1Q14264 604 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 SHBQ15464 509 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 TOMM34Q15785 309 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-205ENST00000409455 IAH1Q2TAA2 248 aaPredicted RBP13.66□□□□□ -0.22
LIMS2-205ENST00000409455 PYY3Q5JQD4 70 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 UBAC2Q8NBM4 344 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 OR5D14Q8NGL3 314 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 KLHDC3Q9BQ90 382 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 UFSP2Q9NUQ7 469 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 ZDBF2Q9HCK1 2354 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 PCDH15Q96QU1 1955 aa13.66□□□□□ -0.22
LIMS2-205ENST00000409455 SYT7O43581 403 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF354AO60765 605 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-205ENST00000409455 YIF1AO95070 293 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 H2BFMP0C1H6 154 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 TDGF1P13385 188 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 AMY2BP19961 511 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 ZNF93P35789 620 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-205ENST00000409455 CDX1P47902 265 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-205ENST00000409455 IGLV3-21P80748 117 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-205ENST00000409455 LINC00346Q8IVM7 164 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 OR13C9Q8NGT0 318 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 PBDC1Q9BVG4 233 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 C1orf123Q9NWV4 160 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 HCRTR2O43614 444 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 DEDDO75618 318 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 IL33O95760 270 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 NUDT14O95848 222 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 THBS4P35443 961 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 CAMLGP49069 296 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 PRTGQ2VWP7 1150 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 Q3ZCU0 254 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 PMS2CLQ68D20 193 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 SGK3Q96BR1 496 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 ADAT3Q96EY9 351 aaPredicted RBP13.65□□□□□ -0.22
LIMS2-205ENST00000409455 ASXL3Q9C0F0 2248 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 LPAR5Q9H1C0 372 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 SLC35B3Q9H1N7 401 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 CENPMQ9NSP4 180 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 GAR1Q9NY12 217 aaKnown RBP13.65□□□□□ -0.22
LIMS2-205ENST00000409455 PPP4R1LQ9P1A2 415 aa13.65□□□□□ -0.22
LIMS2-205ENST00000409455 LAMTOR5O43504 91 aa13.64□□□□□ -0.23
LIMS2-205ENST00000409455 OR2C1O95371 312 aa13.64□□□□□ -0.23
LIMS2-205ENST00000409455 MPIG6BO95866 241 aa13.64□□□□□ -0.23
LIMS2-205ENST00000409455 DANCRP0C864 163 aa13.64□□□□□ -0.23
LIMS2-205ENST00000409455 GLRA1P23415 457 aa13.64□□□□□ -0.23
LIMS2-205ENST00000409455 RBMXP38159 391 aaKnown RBP13.64□□□□□ -0.23
LIMS2-205ENST00000409455 UCP2P55851 309 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms