RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SEC23BQ15437 767 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 TIGD6Q17RP2 521 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 CCDC121Q6ZUS5 278 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 DCXRQ7Z4W1 244 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 ZDHHC21Q8IVQ6 265 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 DYNAPQ8N1N2 210 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 OR5AU1Q8NGC0 362 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 OR10Z1Q8NGY1 313 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 DYDC1Q8WWB3 177 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 REEP6Q96HR9 211 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 MICU1Q9BPX6 476 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 IFT27Q9BW83 186 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 PAPOLGQ9BWT3 736 aaKnown RBP13.45□□□□□ -0.26
CHMP3-203ENST00000409225 MUC13Q9H3R2 512 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 HEXA-AS1Q9H8Q6 139 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 ABCB10Q9NRK6 738 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 CENPMQ9NSP4 180 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 RHBDD3Q9Y3P4 386 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 ENPP4Q9Y6X5 453 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 TRBV4-1A0A0J9YWV2 114 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 A0A1W2PRQ8 180 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 ARPC3O15145 178 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 NPPAP01160 153 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 SLC6A6P31641 620 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 EGFEM1PQ0D2K5 195 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 DGCR6Q14129 220 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 AGBL2Q5U5Z8 902 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 LYPD4Q6UWN0 246 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 CBLL1Q75N03 491 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 CPLX4Q7Z7G2 160 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 CYB561A3Q8NBI2 242 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 ZNRF1Q8ND25 227 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 KCNJ15Q99712 375 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 OR52D1Q9H346 318 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 KRCC1Q9NPI7 259 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-203ENST00000409225 C19orf12Q9NSK7 152 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 NLKQ9UBE8 527 aa13.44□□□□□ -0.26
CHMP3-203ENST00000409225 A0A0G2JND7 137 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 TCRBV4S1A1TA0A5B7 111 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 OR2AT4A6NND4 320 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 VGLL3A8MV65 326 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 CXCR6O00574 342 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 SYNGR1O43759 233 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 DUS4LO95620 317 aaKnown RBP13.43□□□□□ -0.26
CHMP3-203ENST00000409225 SERPINA1P01009 418 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 ANXA2P07355 339 aaKnown RBP13.43□□□□□ -0.26
CHMP3-203ENST00000409225 CAPZA1P52907 286 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 BLCAPP62952 87 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 SPIBQ01892 262 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 GFOD2Q3B7J2 385 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 COQ5Q5HYK3 327 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 SLC35F1Q5T1Q4 408 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 KCTD8Q6ZWB6 473 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 PROKR2Q8NFJ6 384 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 RPS4Y2Q8TD47 263 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 SGK3Q96BR1 496 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 SLAMF6Q96DU3 332 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 RTL8AQ9BWD3 113 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 INPP5EQ9NRR6 644 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 GID8Q9NWU2 228 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 U3KQK5 164 aa13.43□□□□□ -0.26
CHMP3-203ENST00000409225 SACSQ9NZJ4 4579 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 IGKV1D-17A0A075B6S4 117 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 hCG_38984A0A1B0GV85 526 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 ANXA2P2A6NMY6 339 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 BBIP1A8MTZ0 92 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 GSTA4O15217 222 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 ALDOBP05062 364 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 SPARCP09486 303 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 GSK3AP49840 483 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 ERVFRD-1P60508 538 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 IL5RAQ01344 420 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHMP3-203ENST00000409225 RNF144BQ7Z419 303 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 OR52J3Q8NH60 311 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 OR5K1Q8NHB7 308 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 ZNRF4Q8WWF5 429 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 DPF1Q92782 380 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 CMTM6Q9NX76 183 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 PITPNC1Q9UKF7 332 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 FAM32AQ9Y421 112 aaKnown RBP13.42□□□□□ -0.26
CHMP3-203ENST00000409225 PCDHGB5Q9Y5G0 923 aa13.42□□□□□ -0.26
CHMP3-203ENST00000409225 TSSC4Q9Y5U2 329 aaPredicted RBP13.42□□□□□ -0.26
CHMP3-203ENST00000409225 GLRA1P23415 457 aa13.41□□□□□ -0.26
CHMP3-203ENST00000409225 CX3CR1P49238 355 aa13.41□□□□□ -0.26
CHMP3-203ENST00000409225 KLHL12Q53G59 568 aa13.41□□□□□ -0.26
CHMP3-203ENST00000409225 TCTEX1D4Q5JR98 221 aa13.41□□□□□ -0.26
CHMP3-203ENST00000409225 ZNF782Q6ZMW2 699 aaPredicted RBP13.41□□□□□ -0.26
CHMP3-203ENST00000409225 OR51L1Q8NGJ5 315 aa13.41□□□□□ -0.26
CHMP3-203ENST00000409225 COMMD3-BMI1R4GMX3 469 aa13.41□□□□□ -0.26
CHMP3-203ENST00000409225 FAM90A8PA6NJQ4 464 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 TMEM210A6NLX4 147 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 ZNF850A8MQ14 1090 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 ZNF878C9JN71 531 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 C3orf84H3BNL1 204 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 DIRAS1O95057 198 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 CLIC3O95833 236 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 PSG2P11465 335 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 CCL3L1P16619 93 aa13.4□□□□□ -0.26
CHMP3-203ENST00000409225 RPL31P62899 125 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms