RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 OR8B12Q8NGG6 310 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 C15orf40Q8WUR7 153 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 MRPL24Q96A35 216 aaKnown RBP7.38□□□□□ -1.23
SNX13-201ENST00000409076 ZCCHC4Q9H5U6 513 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 ZNF319Q9P2F9 582 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 LOC400499M0QZD8 3231 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 ZNF727A8MUV8 499 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 NPIPA2E9PIF3 369 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 NPIPA3F8WFD2 350 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 PHF1O43189 567 aaPredicted RBP7.38□□□□□ -1.23
SNX13-201ENST00000409076 TTRP02766 147 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 GP1BAP07359 652 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 FGF2P09038 288 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 CPN1P15169 458 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 HLA-BQ31612 363 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 H1FNTQ75WM6 255 aaPredicted RBP7.38□□□□□ -1.23
SNX13-201ENST00000409076 NECAP1Q8NC96 275 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 MR1Q95460 341 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 S100PBPQ96BU1 408 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 SGCZQ96LD1 299 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 IP6K3Q96PC2 410 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 SLC25A21Q9BQT8 299 aaPredicted RBP7.38□□□□□ -1.23
SNX13-201ENST00000409076 NMNAT2Q9BZQ4 307 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 LAT2Q9GZY6 243 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 SMOC1Q9H4F8 434 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 LDAHQ9H6V9 325 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 RASL12Q9NYN1 266 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 CACNA1HO95180 2353 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 TRBV5-5A0A0J9YX44 114 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 H0YIZ8 118 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 RAB27BO00194 218 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 CTDSPLO15194 276 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 TIAF1O95411 115 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 EFNA3P52797 238 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 NDUFA6P56556 154 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 GABREP78334 506 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 SGCBQ16585 318 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 ZNF674Q2M3X9 581 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 ZNF529Q6P280 563 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 TMEM234Q8WY98 164 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 URM1Q9BTM9 101 aaKnown RBP7.38□□□□□ -1.23
SNX13-201ENST00000409076 TNFSF18Q9UNG2 199 aa7.38□□□□□ -1.23
SNX13-201ENST00000409076 ZNF106Q9H2Y7 1883 aaKnown RBP7.38□□□□□ -1.23
SNX13-201ENST00000409076 OR5K4A6NMS3 321 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 C1orf196B1AJZ1 125 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 ZNF814B7Z6K7 855 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 H7C1Q1 480 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 OR2A4O95047 310 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 B4GALT1P15291 398 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 LPAR6P43657 344 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 RPS18P62269 152 aaKnown RBP7.37□□□□□ -1.23
SNX13-201ENST00000409076 RNF4P78317 190 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 EGR3Q06889 387 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 MIDNQ504T8 468 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 AVPI1Q5T686 147 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 GPR157Q5UAW9 335 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 SHEQ5VZ18 495 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 PGAP1Q75T13 922 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 RAB11FIP2Q7L804 512 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 CATSPERDQ86XM0 798 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 ZNF565Q8N9K5 539 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 OR5AP2Q8NGF4 316 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 OR6K3Q8NGY3 331 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 RNF141Q8WVD5 230 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 OR2A7Q96R45 310 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 FBXL17Q9UF56 701 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 RAB22AQ9UL26 194 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 CACNA1BQ00975 2339 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 A6NCN8 305 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 CRHP06850 196 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 ADCYAP1P18509 176 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 OTX2P32243 289 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 PLA2G5P39877 138 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 LTC4SQ16873 150 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 GRINAQ7Z429 371 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 GPBAR1Q8TDU6 330 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 ZNF426Q9BUY5 554 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 SLC5A7Q9GZV3 580 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 OR10A2Q9H208 303 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 SH3BGRL3Q9H299 93 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 SCPEP1Q9HB40 452 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 BIN3Q9NQY0 253 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 SERINC1Q9NRX5 453 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 ARPC4-TTLL3A0A0A6YYG9 625 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 HSD17B6O14756 317 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 HLA-HP01893 362 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 RAG2P55895 527 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 RIPPLY1Q0D2K3 151 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 FABP9Q0Z7S8 132 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 MEF2DQ14814 521 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 TMEM229BQ8NBD8 167 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 SLC38A9Q8NBW4 561 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 OR14K1Q8NGZ2 314 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 OR51H1Q8NH63 302 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 LILRB1Q8NHL6 650 aaPredicted RBP7.37□□□□□ -1.23
SNX13-201ENST00000409076 ZNF837Q96EG3 531 aaPredicted RBP7.37□□□□□ -1.23
SNX13-201ENST00000409076 ZNF764Q96H86 408 aaPredicted RBP7.37□□□□□ -1.23
SNX13-201ENST00000409076 TGIF2Q9GZN2 237 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 PRELID3BQ9Y3B1 194 aa7.37□□□□□ -1.23
SNX13-201ENST00000409076 FLVCR1Q9Y5Y0 555 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms