RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NDUFB3O43676 98 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 LHBP01229 141 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 GYPAP02724 150 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 HKR1P10072 659 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 RPL15P61313 204 aaKnown RBP7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 GNG3P63215 75 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 IL13RA1P78552 427 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 RIPPLY1Q0D2K3 151 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 POU4F2Q12837 409 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 TUSC1Q2TAM9 212 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 LRRC10Q5BKY1 277 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 NXNL2Q5VZ03 156 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 WDR82Q6UXN9 313 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF841Q6ZN19 808 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF826PQ6ZT77 177 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 FAM90A1Q86YD7 464 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 C10orf67Q8IYJ2 551 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 C19orf18Q8NEA5 215 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 OR8B12Q8NGG6 310 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF671Q8TAW3 534 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 ST8SIA4Q92187 359 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 UTP4Q969X6 686 aaKnown RBP7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 MED30Q96HR3 178 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 RNF170Q96K19 258 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 OR8B4Q96RC9 309 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 TEAD3Q99594 435 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 PKP2Q99959 881 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 PCGF1Q9BSM1 259 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 ENPP5Q9UJA9 477 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 RHBDD3Q9Y3P4 386 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 AP4S1Q9Y587 144 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 KPTNQ9Y664 436 aa7.55□□□□□ -1.2
SNORD88A-201ENST00000408314 C5orf63A6NC05 138 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 DHRS7CA6NNS2 312 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 POM121CA8CG34 1229 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF850A8MQ14 1090 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 C22orf46C9J442 243 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 LOC110117498-PIK3R3F6TDL0 507 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 DVL1O14640 695 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 CDIPTO14735 213 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 MRPL3P09001 348 aaKnown RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 IGHV4-38-2P0DP08 117 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 DAPP51397 102 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 CSNK2BP67870 215 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 GUCA2AQ02747 115 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 EGR3Q06889 387 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 HNRNPA0Q13151 305 aaKnown RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 TMED1Q13445 227 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 AWAT1Q58HT5 328 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 BCL2L15Q5TBC7 163 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 ATPAF1Q5TC12 328 aaPredicted RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 SLX4IPQ5VYV7 408 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 TMEM236Q5W0B7 351 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 SHISA2Q6UWI4 295 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 BTN2A1Q7KYR7 527 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 MEPCEQ7L2J0 689 aaKnown RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 KRT74Q7RTS7 529 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 KIR3DL3Q8N743 410 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 SCCPDHQ8NBX0 429 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 CCDC54Q8NEL0 328 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 BBS1Q8NFJ9 593 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 TMEM163Q8TC26 289 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 OR5P3Q8WZ94 311 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 PIGCQ92535 297 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 RFKQ969G6 155 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 DUS3LQ96G46 650 aaKnown RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 WDFY2Q96P53 400 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 MYCBPQ99417 103 aaPredicted RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 PBOV1Q9GZY1 135 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 ESM1Q9NQ30 184 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 FAM206AQ9NX38 181 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 HAO2Q9NYQ3 351 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 CTSZQ9UBR2 303 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 WARS2Q9UGM6 360 aaKnown RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 NUFIP1Q9UHK0 495 aaKnown RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 RPUSD1Q9UJJ7 312 aaKnown RBP7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 POLDIP2Q9Y2S7 368 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 ORC6Q9Y5N6 252 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 POMT1Q9Y6A1 747 aa7.54□□□□□ -1.2
SNORD88A-201ENST00000408314 IGHV3OR16-10A0A075B7F0 116 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 A0A1W2PPH5 198 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 CCDC182A6NF36 153 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 SNTNA6NMZ2 147 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 ZAR1LA6NP61 321 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 TNFRSF13BO14836 293 aaPredicted RBP7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 DHRS3O75911 302 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 KRT8P05787 483 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 CRYBA1P05813 215 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 EGR1P18146 543 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 ANOS1P23352 680 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 GLRA1P23415 457 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 EEF1B2P24534 225 aaKnown RBP7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 ATP6V1E1P36543 226 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 CDC42P60953 191 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 BLMHQ13867 455 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 SMIM21Q3B7S5 101 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 CEACAM21Q3KPI0 293 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 CDONQ4KMG0 1287 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 FAM76BQ5HYJ3 339 aa7.53□□□□□ -1.2
SNORD88A-201ENST00000408314 WDR38Q5JTN6 314 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms