RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 WDR45Q9Y484 360 aa3.72□□□□□ -1.81
HMGB3P19-201ENST00000403971 KCNE3Q9Y6H6 103 aa3.72□□□□□ -1.81
HMGB3P19-201ENST00000403971 ZNF407Q9C0G0 2248 aa3.72□□□□□ -1.81
HMGB3P19-201ENST00000403971 NCKAP5O14513 1909 aa3.72□□□□□ -1.81
HMGB3P19-201ENST00000403971 SVILO95425 2214 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 TRBV11-1A0A0K0K1C0 115 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A1W2PQD3 144 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 DHRS12A0PJE2 317 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 FBLL1A6NHQ2 334 aaKnown RBP3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 DPM1O60762 260 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ENTPD5O75356 428 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 AKR7A3O95154 331 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 H6PDO95479 791 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 LGI1O95970 557 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 SERPINA1P01009 418 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 SERPINA7P05543 415 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 DBIP07108 87 aaKnown RBP3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 NCK1P16333 377 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ATP6V1C1P21283 382 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 TBXA2RP21731 343 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 IL2RGP31785 369 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 OTX2P32243 289 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 MAGEA2P43356 314 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 CXCL6P80162 114 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 CHRNB3Q05901 458 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 GK3PQ14409 553 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 TGIF1Q15583 401 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF141Q15928 474 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 CCDC92Q53HC0 331 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 DHRS4L2Q6PKH6 230 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 Q6ZR54 194 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 SPATA24Q86W54 205 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 RPS19BP1Q86WX3 136 aaKnown RBP3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 GRAMD2AQ8IUY3 354 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC34A3Q8N130 599 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 BCORP1Q8N888 145 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF321PQ8N8H1 164 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ANKFN1Q8N957 763 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR52P1PQ8NH57 321 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 SLC22A8Q8TCC7 542 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 DOK4Q8TEW6 326 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 CANT1Q8WVQ1 401 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 PSMF1Q92530 271 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 STMN2Q93045 179 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 TAMM41Q96BW9 452 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 C8orf44Q96CB5 159 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 RMND5BQ96G75 393 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 C9orf85Q96MD7 179 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 COL21A1Q96P44 957 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 SECISBP2Q96T21 854 aaKnown RBP3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 DOHHQ9BU89 302 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ARMC7Q9H6L4 198 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 CACYBPQ9HB71 228 aaKnown RBP3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 UBQLN4Q9NRR5 601 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 KLRF1Q9NZS2 232 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 SEC14L3Q9UDX4 400 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ANGPTL2Q9UKU9 493 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ABCG2Q9UNQ0 655 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 YARS2Q9Y2Z4 477 aaKnown RBP3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 OR10H1Q9Y4A9 318 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 AP4S1Q9Y587 144 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 AKAP13Q12802 2813 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZGRF1Q86YA3 2104 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 CEP295Q9C0D2 2601 aa3.71□□□□□ -1.82
HMGB3P19-201ENST00000403971 MED12Q93074 2177 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 TPRP12270 2363 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 CELSR3Q9NYQ7 3312 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 MAP1BP46821 2468 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ANKRD11Q6UB99 2663 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 A0A0U1RQV5 110 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 FAM230AA0A1W2PPH8 454 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 A8MUI8 341 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 G3V3Y1 287 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 TP53I11O14683 189 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 LANCL1O43813 399 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 FADS1O60427 444 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 FCMRO60667 390 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 REM1O75628 298 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 UGT2B17O75795 530 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGKV1D-16P01601 117 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 SEMG1P04279 462 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 PABPC4LP0CB38 370 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 GSTT2P0CG29 244 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 GSTT2BP0CG30 244 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 RRASP10301 218 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 IGFBP5P24593 272 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 IL12BP29460 328 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 AQP1P29972 269 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 MLF1P58340 268 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 PPIAP62937 165 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 PLCXD2Q0VAA5 305 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 EXOSC2Q13868 293 aaKnown RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 UBE2V2Q15819 145 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 NRF1Q16656 503 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 DUSP7Q16829 419 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 LIN52Q52LA3 116 aa3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 LRRC23Q53EV4 343 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P19-201ENST00000403971 ZNF311Q5JNZ3 666 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms