RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 ST3GAL3Q11203 375 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 ENDOGQ14249 297 aaKnown RBP5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 OR8B8Q15620 311 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 ANKDD1AQ495B1 522 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 OR2T2Q6IF00 324 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 EPGNQ6UW88 154 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 FBXW12Q6X9E4 464 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 NKAIN4Q8IVV8 208 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 ZSCAN4Q8NAM6 433 aaPredicted RBP5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 MRAPQ8TCY5 172 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 SPRYD4Q8WW59 207 aaPredicted RBP5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 TAMM41Q96BW9 452 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 BPIFA2Q96DR5 249 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 PRSS27Q9BQR3 290 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 CCDC28BQ9BUN5 200 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 SLC22A4Q9H015 551 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 C16orf95Q9H693 158 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 FN3KRPQ9HA64 309 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 PLEKHA2Q9HB19 425 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 C20orf141Q9NUB4 165 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 ATPIF1Q9UII2 106 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 RIMS3Q9UJD0 308 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 VPREB3Q9UKI3 123 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 STARD10Q9Y365 291 aa5.55□□□□□ -1.52
CEACAM1-208ENST00000403461 TRAV38-1A0A0B4J264 116 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 A0A0U1RQK1 487 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 ZNF816-ZNF321PA0A0X1KG74 233 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 A0A1B0GVI7 797 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 IQCF6A8MYZ5 107 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 G3V4G9 280 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 H7C1C5 153 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 LGALS8O00214 317 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 ADAM20O43506 726 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 XPNPEP2O43895 674 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 KHDRBS3O75525 346 aaKnown RBP5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 ECDO95905 644 aaPredicted RBP5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 OPN1MWP04001 364 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 TSPAN19P0C672 248 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 OPN1MW2P0DN77 364 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 OPN1MW3P0DN78 364 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 IFI30P13284 250 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 RBMXP38159 391 aaKnown RBP5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 PSMB10P40306 273 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 ERFP50548 548 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 MTPNP58546 118 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 KRTAP10-3P60369 221 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 LSM6P62312 80 aaKnown RBP5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 LCN6P62502 163 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 HERPUD1Q15011 391 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 PLBD1Q6P4A8 553 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 FAM57BQ71RH2 274 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 OAFQ86UD1 273 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 IGFN1Q86VF2 1251 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 FUNDC1Q8IVP5 155 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 BHLHE23Q8NDY6 225 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 OR4D11Q8NGI4 311 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 OR51A7Q8NH64 312 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 OR5R1Q8NH85 324 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 NPRL2Q8WTW4 380 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 C10orf82Q8WW14 230 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 LHX4Q969G2 390 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 TBX15Q96SF7 602 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 CGREF1Q99674 301 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 SH3GL1Q99961 368 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 HDHD2Q9H0R4 259 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 AURKCQ9UQB9 309 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 NDUFAF1Q9Y375 327 aa5.54□□□□□ -1.52
CEACAM1-208ENST00000403461 NUP214P35658 2090 aaPredicted RBP5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 TRAV27A0A087WT01 109 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 TEX13CA0A0J9YWL9 993 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 OOEPA6NGQ2 149 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 EFCAB9A8MZ26 197 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 H0YL77 283 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 SLC16A7O60669 478 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 TSPAN9O75954 239 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 BAG2O95816 211 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 HLA-DPB1P04440 258 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 MMP9P14780 707 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 CD200P41217 278 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 SLC9A3P48764 834 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 CENPAP49450 140 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 ALKBH1Q13686 389 aaKnown RBP5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 CYLC2Q14093 348 aaPredicted RBP5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 OR8G1Q15617 311 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 CDONQ4KMG0 1287 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 TNFAIP8L3Q5GJ75 292 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 FAM201AQ5SY85 155 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 BEND6Q5SZJ8 279 aaPredicted RBP5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 KPRPQ5T749 579 aaPredicted RBP5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 ERICH5Q6P6B1 374 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 DNM1P34Q6PK57 102 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 LYPD2Q6UXB3 125 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 DLEU7Q6UYE1 221 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 ZNF841Q6ZN19 808 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 Q6ZSV7 163 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 MRPL21Q7Z2W9 205 aaKnown RBP5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 ANKRD13BQ86YJ7 626 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 MICU2Q8IYU8 434 aa5.53□□□□□ -1.52
CEACAM1-208ENST00000403461 GJC3Q8NFK1 279 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms