RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 NR2C1P13056 603 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 FSTP19883 344 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 FXYD4P59646 89 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 SRYQ05066 204 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 UNC119Q13432 240 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ZNF260Q3ZCT1 412 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 NHLRC3Q5JS37 347 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 C9orf152Q5JTZ5 239 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 RGS7BPQ6MZT1 257 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 C11orf87Q6NUJ2 197 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ZNF813Q6ZN06 617 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 RPS19BP1Q86WX3 136 aaKnown RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 AGBL5Q8NDL9 886 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 OR2M3Q8NG83 312 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 EDAQ92838 391 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 NAA11Q9BSU3 229 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 CHRDQ9H2X0 955 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 TREM1Q9NP99 234 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 C14orf166Q9Y224 244 aaKnown RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 CSAG2Q9Y5P2 127 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ATG2AQ2TAZ0 1938 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 TMEM131Q92545 1883 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 A0A0A6YYH2 397 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 A6NJ64 397 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ARGFXA6NJG6 315 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 TMEM200CA6NKL6 621 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ZNF850A8MQ14 1090 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 D6RAR5 112 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 H3BMH7 237 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 TNFSF11O14788 317 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 TXNL1O43396 289 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ANGPTL7O43827 346 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ADAP1O75689 374 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 UBBP0CG47 229 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 IGFBP3P17936 291 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 MSR1P21757 451 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 RBMXP38159 391 aaKnown RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 PCP4P48539 62 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 SSR4P51571 173 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 MTCP1P56278 107 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 RPS27AP62979 156 aaKnown RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 UBA52P62987 128 aaKnown RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 C1orf100Q5SVJ3 147 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ZNF585AQ6P3V2 769 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 PGAP1Q75T13 922 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 DOK3Q7L591 496 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 NFAM1Q8NET5 270 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 GJC3Q8NFK1 279 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 OR5M8Q8NGP6 311 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 DNASE2BQ8WZ79 361 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 ZNF385AQ96PM9 386 aaKnown RBP6.8□□□□□ -1.32
HDAC9-201ENST00000401921 SPSB2Q99619 263 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 GPR173Q9NS66 373 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 WNT16Q9UBV4 365 aa6.8□□□□□ -1.32
HDAC9-201ENST00000401921 FAM221AA4D161 298 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 LY86O95711 162 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 P04436 131 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 ISG15P05161 165 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 CCL3P10147 92 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 SMCO1Q147U7 214 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 RSU1Q15404 277 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 KISS1Q15726 138 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 CSRP2Q16527 193 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 PCK2Q16822 640 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 FAM76BQ5HYJ3 339 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 ZNF660Q6AZW8 331 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-201ENST00000401921 RBMS3Q6XE24 437 aaKnown RBP6.79□□□□□ -1.32
HDAC9-201ENST00000401921 NAXDQ8IW45 347 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 WDSUB1Q8N9V3 476 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 OR2AE1Q8NHA4 323 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 TERB2Q8NHR7 220 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 POC1BQ8TC44 478 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 NEK7Q8TDX7 302 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 SLC25A43Q8WUT9 341 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-201ENST00000401921 SCGB3A2Q96PL1 93 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 TMPRSS13Q9BYE2 586 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 LRP4O75096 1905 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 A0A1B0GTQ1 180 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 M0R135 149 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 ZNF205O95201 554 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 IGHMP01871 453 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 PGA4P0DJD7 388 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 PGA3P0DJD8 388 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 SPP1P10451 314 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 PNLIPP16233 465 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 MGMTP16455 207 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 OPRM1P35372 400 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 RPS18P62269 152 aaKnown RBP6.79□□□□□ -1.32
HDAC9-201ENST00000401921 TAF9Q16594 264 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 ACOT7LQ6ZUV0 252 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 GPR137CQ8N3F9 429 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 OR10S1Q8NGN2 331 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 CA5BP1Q8WTZ4 195 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 SLC39A7Q92504 469 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 SPTSSAQ969W0 71 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 CPNE2Q96FN4 548 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-201ENST00000401921 ZNF799Q96GE5 643 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 TMEM68Q96MH6 324 aa6.79□□□□□ -1.32
HDAC9-201ENST00000401921 TSNAXQ99598 290 aaKnown RBP6.79□□□□□ -1.32
HDAC9-201ENST00000401921 PRRG4Q9BZD6 226 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms