RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 PDCD1Q15116 288 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 ZNF404Q494X3 552 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 LRP11Q86VZ4 500 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 PIAS4Q8N2W9 510 aaPredicted RBP10.1□□□□□ -0.79
SKA3-203ENST00000400018 OR10K1Q8NGX5 313 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 RPS4Y2Q8TD47 263 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 RND1Q92730 232 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 IFT22Q9H7X7 185 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 ZNF581Q9P0T4 197 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 KMT2BQ9UMN6 2715 aaPredicted RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 BET1O15155 118 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 UCHL1P09936 223 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 FABP6P51161 128 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 EFNB2P52799 333 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 POLR2GP62487 172 aaKnown RBP eCLIP10.09□□□□□ -0.79
SKA3-203ENST00000400018 GPR50Q13585 617 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 GK2Q14410 553 aaPredicted RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 UBE2V2Q15819 145 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 ZCCHC24Q8N2G6 241 aaKnown RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 JAGN1Q8N5M9 183 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 SLC25A46Q96AG3 418 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 TCF7L1Q9HCS4 588 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 HHLA2Q9UM44 414 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 HELZ2Q9BYK8 2649 aaKnown RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 IGHV1-18A0A0C4DH31 117 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 TRBV5-5A0A0J9YX44 114 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 A0A1B0GVI7 797 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 MEIOCA2RUB1 952 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 FAM25EA8MYX2 175 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 ZNF14P17017 642 aaPredicted RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 RAB3BP20337 219 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 FGF9P31371 208 aaPredicted RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 OTX1P32242 354 aaPredicted RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 MPV17P39210 176 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 HAAOP46952 286 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 TIMM50Q3ZCQ8 353 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 SFXN4Q6P4A7 337 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 ZNF600Q6ZNG1 722 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 C1QL2Q7Z5L3 287 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 BIVMQ86UB2 503 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 ANGPTL5Q86XS5 388 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 SPTSSAQ969W0 71 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 TRAF4Q9BUZ4 470 aaPredicted RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 HDHD2Q9H0R4 259 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 MIXL1Q9H2W2 232 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 ZMAT3Q9HA38 289 aaKnown RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 GPR160Q9UJ42 338 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 ELF5Q9UKW6 265 aaPredicted RBP10.09□□□□□ -0.79
SKA3-203ENST00000400018 RHBDD3Q9Y3P4 386 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 MED13LQ71F56 2210 aa10.09□□□□□ -0.79
SKA3-203ENST00000400018 ZFHX3Q15911 3703 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 ANGPTL7O43827 346 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 COX5AP20674 150 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 CA7P43166 264 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 GRB2P62993 217 aaKnown RBP10.08□□□□□ -0.8
SKA3-203ENST00000400018 LRRTM1Q86UE6 522 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 MS4A15Q8N5U1 240 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 KBTBD8Q8NFY9 601 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 OR51D1Q8NGF3 324 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 PIGCQ92535 297 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 DMRTA2Q96SC8 542 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 MNTQ99583 582 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 TREM2Q9NZC2 230 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 FAM230AA0A1W2PPH8 454 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 HMX3A6NHT5 357 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 MYL9P24844 172 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 HOXC12P31275 282 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 APLNRP35414 380 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 SNU13P55769 128 aaKnown RBP10.08□□□□□ -0.8
SKA3-203ENST00000400018 TGFBR3Q03167 851 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 UNQ9370/PRO34162Q6UXP9 181 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 OR56B2PQ8NGI1 322 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 OR4D6Q8NGJ1 314 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 ZFAND1Q8TCF1 268 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 WFIKKN1Q96NZ8 548 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 PLEKHA1Q9HB21 404 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 GLRX2Q9NS18 164 aa10.08□□□□□ -0.8
SKA3-203ENST00000400018 ZNF275Q9NSD4 429 aaPredicted RBP10.08□□□□□ -0.8
SKA3-203ENST00000400018 MRPS7Q9Y2R9 242 aaKnown RBP10.08□□□□□ -0.8
SKA3-203ENST00000400018 IQCMA0A1B0GVH7 501 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 TSC22D2O75157 780 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 THBS2P35442 1172 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 FAM3AP98173 230 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 PLP2Q04941 152 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 RBPJQ06330 500 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 BEND4Q6ZU67 534 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 ST6GALNAC3Q8NDV1 305 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 OR14K1Q8NGZ2 314 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 LGALS14Q8TCE9 139 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 MRPL48Q96GC5 212 aaKnown RBP10.07□□□□□ -0.8
SKA3-203ENST00000400018 FGF23Q9GZV9 251 aaPredicted RBP10.07□□□□□ -0.8
SKA3-203ENST00000400018 MMP27Q9H306 513 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 OR5H1A6NKK0 313 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 H0YL77 283 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 SPRY1O43609 319 aaPredicted RBP10.07□□□□□ -0.8
SKA3-203ENST00000400018 C1QL1O75973 258 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 PLAUP00749 431 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 TFF1P04155 84 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 SERPINA5P05154 406 aa10.07□□□□□ -0.8
SKA3-203ENST00000400018 EIF4EP06730 217 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms