RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SIGLECL1Q8N7X8 197 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 TAAR6Q96RI8 345 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 OR1A1Q9P1Q5 309 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 IL5P05113 134 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 DSCR4P56555 118 aaPredicted RBP12.36□□□□□ -0.43
VAPA-202ENST00000400000 PDZK1IP1Q13113 114 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 FZD5Q13467 585 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 FCRL6Q6DN72 434 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 GATCO43716 136 aaKnown RBP12.36□□□□□ -0.43
VAPA-202ENST00000400000 PMCHP20382 165 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 RPL12P30050 165 aaKnown RBP12.36□□□□□ -0.43
VAPA-202ENST00000400000 BPIFB3P59826 476 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 SLC17A1Q14916 467 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 LHX8Q68G74 356 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 RER1O15258 196 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 OR5H8P0DN80 308 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 CEBPDP49716 269 aaPredicted RBP12.36□□□□□ -0.43
VAPA-202ENST00000400000 CCR5P51681 352 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 OTUD1Q5VV17 481 aaPredicted RBP12.36□□□□□ -0.43
VAPA-202ENST00000400000 ZNF788Q6ZQV5 615 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 CLDN23Q96B33 292 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 ADGRG7Q96K78 797 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 DLL4Q9NR61 685 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 PRR13Q9NZ81 148 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 ACOT8O14734 319 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 FOXL2P58012 376 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 SMIM21Q3B7S5 101 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 ZNF683Q8IZ20 524 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 CMC2Q9NRP2 79 aa12.36□□□□□ -0.43
VAPA-202ENST00000400000 FRG2CA6NGY1 282 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 COL9A1P20849 921 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 TAS2R45P59539 299 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 HFEQ30201 348 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 LRP12Q9Y561 859 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 GALNSP34059 522 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 C19orf48Q6RUI8 117 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 KMT5CQ86Y97 462 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 ZPBPQ9BS86 351 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 NKX6-2Q9C056 277 aaPredicted RBP12.35□□□□□ -0.43
VAPA-202ENST00000400000 A0A1W2PPQ1 181 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 PCBP4P57723 403 aaKnown RBP12.35□□□□□ -0.43
VAPA-202ENST00000400000 SLC51BQ86UW2 128 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 OR13F1Q8NGS4 319 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 ECI1P42126 302 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 AMTP48728 403 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 LRP11Q86VZ4 500 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 CORO2AQ92828 525 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 PDFQ9HBH1 243 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 IGHV3OR15-7A0A075B7D8 119 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 CRYABP02511 175 aaKnown RBP12.35□□□□□ -0.43
VAPA-202ENST00000400000 GPX2P18283 190 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 ORM2P19652 201 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 EPHA2P29317 976 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 FZD2Q14332 565 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 MICBQ29980 383 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 Q3ZCU0 254 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 OR5AP2Q8NGF4 316 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 OCIAD1Q9NX40 245 aa12.35□□□□□ -0.43
VAPA-202ENST00000400000 LRRC3CA6NJW4 275 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 TFAP2AP05549 437 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 SPACA9Q96E40 222 aaPredicted RBP12.34□□□□□ -0.43
VAPA-202ENST00000400000 FAAP24Q9BTP7 215 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 OR51I2Q9H344 312 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 C4AP0C0L4 1744 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 TMPRSS2O15393 492 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 GP2P55259 537 aaKnown RBP12.34□□□□□ -0.43
VAPA-202ENST00000400000 MRGPREQ86SM8 312 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 MRGPRDQ8TDS7 321 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 SCN3AQ9NY46 2000 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 H7BYZ3 331 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 CDX4O14627 284 aaPredicted RBP12.34□□□□□ -0.43
VAPA-202ENST00000400000 ZDHHC11BP0C7U3 371 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 CTGFP29279 349 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 TPPP2P59282 170 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 DPTQ07507 201 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 CNRIP1Q96F85 164 aaPredicted RBP12.34□□□□□ -0.43
VAPA-202ENST00000400000 POM121L2Q96KW2 1035 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 MRGPRX4Q96LA9 322 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 PPIL1Q9Y3C6 166 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 UFC1Q9Y3C8 167 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 A0A1W2PNV4 684 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 DHHO43323 396 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 AKR7A2O43488 359 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 DUS4LO95620 317 aaKnown RBP12.34□□□□□ -0.43
VAPA-202ENST00000400000 OR4E1P0C645 316 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 NOVP48745 357 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 LYZP61626 148 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 COA4Q9NYJ1 87 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 TBX21Q9UL17 535 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 AUP1Q9Y679 476 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 SPAG17Q6Q759 2223 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 RFPL4AA6NLU0 287 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 RFPL4AL1F8VTS6 287 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 ADAM10O14672 748 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 SLC25A5P05141 298 aaKnown RBP12.34□□□□□ -0.43
VAPA-202ENST00000400000 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms