RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PRKYO43930 277 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF254O75437 659 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 ECDO95905 644 aaPredicted RBP11.12□□□□□ -0.63
VCX3A-202ENST00000398729 FCGR1AP12314 374 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 DCTDP32321 178 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 CFHR2P36980 270 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 MAP2K3P46734 347 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 BPIFB3P59826 476 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 POU4F2Q12837 409 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 PDLIM3Q53GG5 364 aaPredicted RBP11.12□□□□□ -0.63
VCX3A-202ENST00000398729 AWAT1Q58HT5 328 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 GPR157Q5UAW9 335 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 KCTD8Q6ZWB6 473 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 ZDHHC23Q8IYP9 409 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF679Q8IYX0 411 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 OR5P3Q8WZ94 311 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 ITFG2Q969R8 447 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 HIST1H2AAQ96QV6 131 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 OR8B4Q96RC9 309 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 CNN2Q99439 309 aaKnown RBP11.12□□□□□ -0.63
VCX3A-202ENST00000398729 PKP2Q99959 881 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 PCGF1Q9BSM1 259 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 TLNRD1Q9H1K6 362 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 RASSF4Q9H2L5 321 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 ENOPH1Q9UHY7 261 aa11.12□□□□□ -0.63
VCX3A-202ENST00000398729 A0A0U1RQV5 110 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF816-ZNF321PA0A0X1KG74 233 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 SLC22A31A6NKX4 558 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 P2RY10O00398 339 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 MITFO75030 526 aaPredicted RBP11.11□□□□□ -0.63
VCX3A-202ENST00000398729 TOX4O94842 621 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 ATP6V1B1P15313 513 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 RIDAP52758 137 aaKnown RBP11.11□□□□□ -0.63
VCX3A-202ENST00000398729 ROM1Q03395 351 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 FOXL1Q12952 345 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF829Q3KNS6 432 aaPredicted RBP11.11□□□□□ -0.63
VCX3A-202ENST00000398729 METTL11BQ5VVY1 283 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 SLX4IPQ5VYV7 408 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 NXNL2Q5VZ03 156 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 KDM4DQ6B0I6 523 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 BTN2A1Q7KYR7 527 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 MEPCEQ7L2J0 689 aaKnown RBP11.11□□□□□ -0.63
VCX3A-202ENST00000398729 SLC36A1Q7Z2H8 476 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 AMIGO2Q86SJ2 522 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 COMMD2Q86X83 199 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 TCEANCQ8N8B7 351 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 OR10Z1Q8NGY1 313 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 ST8SIA4Q92187 359 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 SLC25A28Q96A46 364 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 C12orf43Q96C57 262 aaKnown RBP11.11□□□□□ -0.63
VCX3A-202ENST00000398729 DUS3LQ96G46 650 aaKnown RBP11.11□□□□□ -0.63
VCX3A-202ENST00000398729 RNF170Q96K19 258 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 C1orf147Q96MC9 270 aaPredicted RBP11.11□□□□□ -0.63
VCX3A-202ENST00000398729 CCL13Q99616 98 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 GABARAPL1Q9H0R8 117 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 FAM206AQ9NX38 181 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 IKZF2Q9UKS7 526 aa11.11□□□□□ -0.63
VCX3A-202ENST00000398729 ZAR1LA6NP61 321 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 SRRM5B3KS81 715 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
VCX3A-202ENST00000398729 CLDN34H7C241 214 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 CIB2O75838 187 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 SFTPBP07988 381 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 RNASE1P07998 156 aaKnown RBP11.1□□□□□ -0.63
VCX3A-202ENST00000398729 HKR1P10072 659 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 EPHA2P29317 976 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 ACTR3P61158 418 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 EFNB1P98172 346 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 SLC9A3R2Q15599 337 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 FAM76BQ5HYJ3 339 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 WDR38Q5JTN6 314 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 AADACL4Q5VUY2 407 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 C12orf73Q69YU5 71 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 BRD3OSQ6XYD6 125 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 BCDIN3DQ7Z5W3 292 aaKnown RBP11.1□□□□□ -0.63
VCX3A-202ENST00000398729 THAP5Q7Z6K1 395 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 SCCPDHQ8NBX0 429 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 TMEM163Q8TC26 289 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 HPSE2Q8WWQ2 592 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 RPL3LQ92901 407 aaKnown RBP11.1□□□□□ -0.63
VCX3A-202ENST00000398729 ZDHHC16Q969W1 377 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 WDFY2Q96P53 400 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 IL4I1Q96RQ9 567 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 MNTQ99583 582 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF747Q9BV97 191 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 TTTY10Q9BZA0 68 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 PBOV1Q9GZY1 135 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF696Q9H7X3 374 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 HAO2Q9NYQ3 351 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 DNAJB11Q9UBS4 358 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 RPUSD1Q9UJJ7 312 aaKnown RBP11.1□□□□□ -0.63
VCX3A-202ENST00000398729 COPS3Q9UNS2 423 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 PCDHGB1Q9Y5G3 927 aa11.1□□□□□ -0.63
VCX3A-202ENST00000398729 SOX21Q9Y651 276 aaPredicted RBP11.1□□□□□ -0.63
VCX3A-202ENST00000398729 PRR32B1ATL7 298 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 M0R129 80 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 GPR37O15354 613 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 NDUFB3O43676 98 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 MTRF1O75570 445 aaKnown RBP11.09□□□□□ -0.63
VCX3A-202ENST00000398729 FCN3O75636 299 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms