RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FAM26EQ8N5C1 309 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 EDARADDQ8WWZ3 215 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 CLDN23Q96B33 292 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 CHEK1O14757 476 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 ST8SIA3O43173 380 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 GFRA3O60609 400 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 HPP00738 406 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 PDGFAP04085 211 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 CD3DP04234 171 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 DOK1Q99704 481 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 POLR2AP24928 1970 aaKnown RBP10.16□□□□□ -0.78
TTC28-201ENST00000397906 BTN1A1Q13410 526 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 TMEM41BQ5BJD5 291 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 C1orf53Q5VUE5 145 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 ARHGEF39Q8N4T4 335 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 SLC6A13Q9NSD5 602 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 ATF1P18846 271 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 DUS3LQ96G46 650 aaKnown RBP10.16□□□□□ -0.78
TTC28-201ENST00000397906 GAB2Q9UQC2 676 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 ANKRD31Q8N7Z5 1873 aa10.16□□□□□ -0.78
TTC28-201ENST00000397906 CASP3P42574 277 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 SOHLH1Q5JUK2 328 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 ZNF547Q8IVP9 402 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 OR2A5Q96R48 311 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 NDUFB11Q9NX14 153 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 NPTNQ9Y639 398 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 OPN1MWP04001 364 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 OPN1MW2P0DN77 364 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 OPN1MW3P0DN78 364 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 PTOV1Q86YD1 416 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 OR2G2Q8NGZ5 317 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 PLEKHB1Q9UF11 243 aaPredicted RBP10.15□□□□□ -0.78
TTC28-201ENST00000397906 NAGKQ9UJ70 344 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 ZNF26P17031 533 aaPredicted RBP10.15□□□□□ -0.78
TTC28-201ENST00000397906 VMA21Q3ZAQ7 101 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 OR2Y1Q8NGV0 311 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 EXTL1Q92935 676 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 AUNIPQ9H7T9 357 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 SMIM17P0DL12 118 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 GPR31O00270 319 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 NGFP01138 241 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 FAM27D1Q5T7N8 215 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 WDR74Q6RFH5 385 aaPredicted RBP10.15□□□□□ -0.78
TTC28-201ENST00000397906 OR13F1Q8NGS4 319 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 SLC7A6Q92536 515 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 GAL3ST2Q9H3Q3 398 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 PSG11Q9UQ72 335 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 POMT1Q9Y6A1 747 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 CCR9P51686 369 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 GNG3P63215 75 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 FABP5Q01469 135 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 TOMM34Q15785 309 aaPredicted RBP10.15□□□□□ -0.78
TTC28-201ENST00000397906 C4orf45Q96LM5 186 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 DERL3Q96Q80 235 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 ICAM5Q9UMF0 924 aa10.15□□□□□ -0.78
TTC28-201ENST00000397906 KIAA1217Q5T5P2 1943 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 CROCCQ5TZA2 2017 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 UBE2L5PA0A1B0GUS4 154 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 AVPR2P30518 371 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 MFSD4AQ8N468 514 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 ZNF331Q9NQX6 463 aaPredicted RBP10.15□□□□□ -0.79
TTC28-201ENST00000397906 FLVCR2Q9UPI3 526 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 ZNF724A8MTY0 619 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 CYC1P08574 325 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 CT62P0C5K7 136 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 OR4S1Q8NGB4 309 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 C20orf141Q9NUB4 165 aa10.15□□□□□ -0.79
TTC28-201ENST00000397906 SULT1C4O75897 302 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 ADRA2CP18825 462 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 FGF7P21781 194 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 PMP22Q01453 160 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 ACOT7LQ6ZUV0 252 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 AKR7A2O43488 359 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 FAM122CQ6P4D5 195 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 ZNRF4Q8WWF5 429 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 DDOQ99489 341 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 PRDM6Q9NQX0 595 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 TRIP12Q14669 1992 aaPredicted RBP10.14□□□□□ -0.79
TTC28-201ENST00000397906 FTH1P19P0C7X4 201 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 ZBTB25P24278 435 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 RHBDD2Q6NTF9 364 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 PXT1Q8NFP0 134 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 POM121L2Q96KW2 1035 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 WNT1P04628 370 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 GUCA2AQ02747 115 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 SYT6Q5T7P8 510 aaPredicted RBP10.14□□□□□ -0.79
TTC28-201ENST00000397906 OR5B3Q8NH48 314 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 AKR1E2Q96JD6 320 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 PEX11BO96011 259 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 H2AFB1P0C5Y9 115 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 HTN1P15515 57 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 FOXL2P58012 376 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 TPBGQ13641 420 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 TMUB2Q71RG4 321 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 DNAJB12Q9NXW2 375 aaKnown RBP10.14□□□□□ -0.79
TTC28-201ENST00000397906 EML2O95834 649 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 TAS2R45P59539 299 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 SSX7Q7RTT5 188 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 APELAP0DMC3 54 aa10.14□□□□□ -0.79
TTC28-201ENST00000397906 HIST2H3AQ71DI3 136 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms