RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 C3orf80F5H4A9 247 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 PRB2P02812 416 aaPredicted RBP13.28□□□□□ -0.28
CUX2-202ENST00000397643 IRF2P14316 349 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 PYCR1P32322 319 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 BLVRAP53004 296 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 SNRPGP62308 76 aaKnown RBP13.28□□□□□ -0.28
CUX2-202ENST00000397643 HIST1H3AP68431 136 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 IL5RAQ01344 420 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 KRTAP27-1Q3LI81 207 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 KLHL12Q53G59 568 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 HIST2H3PS2Q5TEC6 136 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 ZNF691Q5VV52 312 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 CD276Q5ZPR3 534 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 GDPGP1Q6ZNW5 385 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 HIST2H3AQ71DI3 136 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 GID4Q8IVV7 300 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 ERGIC1Q969X5 290 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 ZNF184Q99676 751 aaPredicted RBP13.28□□□□□ -0.28
CUX2-202ENST00000397643 COQ7Q99807 217 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 UFSP2Q9NUQ7 469 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 HSPE1-MOB4S4R3N1 261 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 RYR3Q15413 4870 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 DCTN6O00399 190 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 PRODHO43272 600 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 TSPAN9O75954 239 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 HLA-DQA2P01906 255 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 GYPBP06028 91 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 CSF1P09603 554 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 RPS7P62081 194 aaKnown RBP13.27□□□□□ -0.29
CUX2-202ENST00000397643 KCNMB1Q16558 191 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 SLC35D3Q5M8T2 416 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 AADACL4Q5VUY2 407 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 METTL11BQ5VVY1 283 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 MEDAGQ5VYS4 303 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 NXNL2Q5VZ03 156 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 SFRP4Q6FHJ7 346 aaPredicted RBP13.27□□□□□ -0.29
CUX2-202ENST00000397643 ENTHD1Q8IYW4 607 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 C8orf59Q8N0T1 100 aaPredicted RBP13.27□□□□□ -0.29
CUX2-202ENST00000397643 OR11L1Q8NGX0 322 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 RHOXF1Q8NHV9 184 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 RFKQ969G6 155 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 Q96MT0 163 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 HCAR1Q9BXC0 346 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 CLN6Q9NWW5 311 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 ERVK-18Q9QC07 812 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 RAB26Q9ULW5 256 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 LHFPL6Q9Y693 200 aa13.27□□□□□ -0.29
CUX2-202ENST00000397643 SNTNA6NMZ2 147 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 LGALS8O00214 317 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 GLCEO94923 617 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 PTBP3O95758 552 aaKnown RBP13.26□□□□□ -0.29
CUX2-202ENST00000397643 CLIC3O95833 236 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 CLUP10909 449 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 FMO3P31513 532 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 EGR3Q06889 387 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 APOFQ13790 326 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 GK2Q14410 553 aaPredicted RBP13.26□□□□□ -0.29
CUX2-202ENST00000397643 SLC25A30Q5SVS4 291 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 LCN1P1Q5VSP4 162 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 MEPCEQ7L2J0 689 aaKnown RBP13.26□□□□□ -0.29
CUX2-202ENST00000397643 PDZD9Q8IXQ8 264 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 PNLDC1Q8NA58 520 aaKnown RBP13.26□□□□□ -0.29
CUX2-202ENST00000397643 BBS1Q8NFJ9 593 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 OR51L1Q8NGJ5 315 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 OR6K6Q8NGW6 343 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 HDHD2Q9H0R4 259 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 Q9H521 79 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 ZNRD1Q9P1U0 126 aa13.26□□□□□ -0.29
CUX2-202ENST00000397643 ZNF816-ZNF321PA0A0X1KG74 233 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 PIN1P1O15428 100 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 ADAM20O43506 726 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 OPN1MWP04001 364 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 OPN1MW2P0DN77 364 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 OPN1MW3P0DN78 364 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 ZNF823P16415 610 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 GSTT1P30711 240 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 ARF6P62330 175 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 MEP1BQ16820 701 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 DHRS7BQ6IAN0 325 aaPredicted RBP13.25□□□□□ -0.29
CUX2-202ENST00000397643 BCDIN3DQ7Z5W3 292 aaKnown RBP13.25□□□□□ -0.29
CUX2-202ENST00000397643 THAP5Q7Z6K1 395 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 SCCPDHQ8NBX0 429 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 TEAD3Q99594 435 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 DPAGT1Q9H3H5 408 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 DNAJC27Q9NZQ0 273 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 RNF7Q9UBF6 113 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 VPREB3Q9UKI3 123 aa13.25□□□□□ -0.29
CUX2-202ENST00000397643 ENTPD6O75354 484 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 GNAO1P09471 354 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 ACSM4P0C7M7 580 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 GABRB1P18505 474 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 SLC2A5P22732 501 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 HTR1FP30939 366 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 ISL1P61371 349 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 DBPQ10586 325 aaPredicted RBP13.24□□□□□ -0.29
CUX2-202ENST00000397643 TMED1Q13445 227 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 KCNJ8Q15842 424 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 CORO6Q6QEF8 472 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 BTN2A1Q7KYR7 527 aa13.24□□□□□ -0.29
CUX2-202ENST00000397643 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms