RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 H3F3CQ6NXT2 135 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 RHOUQ7L0Q8 258 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 SKA3Q8IX90 412 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 C17orf78Q8N4C9 275 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 WDYHV1Q96HA8 205 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 PHB2Q99623 299 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 PROB1E7EW31 1015 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 SNAPC5O75971 98 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CNOT4O95628 575 aaKnown RBP7.26□□□□□ -1.25
PTPRD-204ENST00000397606 GLAP06280 429 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CTXN2P0C2S0 81 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 TUBG1P23258 451 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CDK2P24941 298 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 PTAFRP25105 342 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CD34P28906 385 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CD83Q01151 205 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CDK10Q15131 360 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 Q6ZT83 130 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 UTS2BQ765I0 119 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 BATF2Q8N1L9 274 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 TUBG2Q9NRH3 451 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 TAAR3PQ9P1P4 343 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 MT-ND4P03905 459 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 GIFP27352 417 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 TGFBR1P36897 503 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CLDN18P56856 261 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 SCAND1P57086 179 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 TAS2R20P59543 309 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 ERVK-16P61578 105 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 SFRP5Q5T4F7 317 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 STEAP1BQ6NZ63 245 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CHPT1Q8WUD6 406 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 RDH5Q92781 318 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 TMEM54Q969K7 222 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CMTM3Q96MX0 182 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 SPIN2AQ99865 258 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 SPIN2BQ9BPZ2 258 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 ASF1BQ9NVP2 202 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 FOXD3Q9UJU5 478 aaPredicted RBP7.26□□□□□ -1.25
PTPRD-204ENST00000397606 M0R233 179 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CD79BP40259 229 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 PTGFRP43088 359 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 TNFAIP6P98066 277 aaPredicted RBP7.26□□□□□ -1.25
PTPRD-204ENST00000397606 GNMTQ14749 295 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 ACSF3Q4G176 576 aaPredicted RBP7.26□□□□□ -1.25
PTPRD-204ENST00000397606 LYPD8Q6UX82 237 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 OR2W3Q7Z3T1 314 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 MDS2Q8NDY4 140 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 FBLIM1Q8WUP2 373 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 RAB1BQ9H0U4 201 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 CXXC4Q9H2H0 198 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 ZFP57Q9NU63 452 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 TBC1D24Q9ULP9 559 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 FZR1Q9UM11 496 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 RNF212BA8MTL3 300 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 ARPC1BO15143 372 aaKnown RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 ANGPTL7O43827 346 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 CBR1P16152 277 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 RBMS2Q15434 407 aaKnown RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 NSUN5P2Q63ZY6 315 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 CFAP77Q6ZQR2 320 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 PRSS35Q8N3Z0 413 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 KIRREL1Q96J84 757 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 DMRTB1Q96MA1 342 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 NKX3-1Q99801 234 aaPredicted RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 NOX3Q9HBY0 568 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SLC17A5Q9NRA2 495 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 NECAP2Q9NVZ3 263 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 ELOVL5Q9NYP7 299 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 PINLYPA6NC86 204 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SIRPB1O00241 398 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SPRY1O43609 319 aaPredicted RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 RAMP1O60894 148 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 GSTP1P09211 210 aaKnown RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 COX5BP10606 129 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 EVX1P49640 407 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 MFGE8Q08431 387 aaPredicted RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 CATR1Q13166 79 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SRSF6Q13247 344 aaKnown RBP7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SLC25A35Q3KQZ1 300 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 DMRTC1Q5HYR2 192 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 OR10K2Q6IF99 312 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 GSG1LQ6UXU4 331 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 ZNF695Q8IW36 515 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 PPP1R14BQ96C90 147 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 NMNAT2Q9BZQ4 307 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 MS4A5Q9H3V2 200 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 LIPGQ9Y5X9 500 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 FXYD6-FXYD2A0A087WZ82 144 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 A0A0G2JMP0 313 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 K7ENP7 123 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 CD1AP06126 327 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 ECI1P42126 302 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 RAB2AP61019 212 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 LTC4SQ16873 150 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 SWI5Q1ZZU3 235 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 MICBQ29980 383 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 HFEQ30201 348 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 IDO2Q6ZQW0 420 aa7.25□□□□□ -1.25
PTPRD-204ENST00000397606 CMTM4Q8IZR5 234 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms