RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 PPP1R8Q12972 351 aaKnown RBP13.53□□□□□ -0.24
DDR1-229ENST00000396342 PRDX4Q13162 271 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 LCN8Q6JVE9 175 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 KCTD18Q6PI47 426 aaPredicted RBP13.53□□□□□ -0.24
DDR1-229ENST00000396342 WDR82Q6UXN9 313 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 CD300LDQ6UXZ3 194 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 THAP5Q7Z6K1 395 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 LDLRAD3Q86YD5 345 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 ZDHHC23Q8IYP9 409 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 OR10Z1Q8NGY1 313 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 OR4Q3Q8NH05 313 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 OR5R1Q8NH85 324 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 ZNF671Q8TAW3 534 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 PIGCQ92535 297 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 FAM234AQ9H0X4 552 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 MMP27Q9H306 513 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 RHBDD3Q9Y3P4 386 aa13.53□□□□□ -0.24
DDR1-229ENST00000396342 A0A0U1RQK1 487 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 hCG_38984A0A1B0GV85 526 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 hCG_1809904A0A1W2PP81 198 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 A0A1W2PPE2 198 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 A0A1W2PR64 198 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 A0A1W2PRV1 198 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 FAM183AA6NL82 134 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 ZNF850A8MQ14 1090 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 PRODHO43272 600 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 CALB2P22676 271 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 IER3P46695 156 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 MAP2K3P46734 347 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 GABRA2P47869 451 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 CAPZA1P52907 286 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 ZNRF4Q8WWF5 429 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 FEVQ99581 238 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 PRRG3Q9BZD7 231 aa13.52□□□□□ -0.25
DDR1-229ENST00000396342 SLC25A10Q9UBX3 287 aaPredicted RBP13.52□□□□□ -0.25
DDR1-229ENST00000396342 ARRDC5A6NEK1 342 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 H0YAE9 185 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 IGHV4-59P01825 116 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 GLRA1P23415 457 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 TGFBR2P37173 567 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 OPRL1P41146 370 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 ACTR3P61158 418 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 CSNK2BP67870 215 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 TAF9Q16594 264 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 PDLIM3Q53GG5 364 aaPredicted RBP13.51□□□□□ -0.25
DDR1-229ENST00000396342 LCN1P1Q5VSP4 162 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 PLBD1Q6P4A8 553 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 METAP1DQ6UB28 335 aaPredicted RBP13.51□□□□□ -0.25
DDR1-229ENST00000396342 C1orf122Q6ZSJ8 110 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 PIGWQ7Z7B1 504 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 FAM216BQ8N7L0 139 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 OR5D13Q8NGL4 314 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 OTOSQ8NHW6 89 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 CCDC124Q96CT7 223 aaKnown RBP13.51□□□□□ -0.25
DDR1-229ENST00000396342 ASB9Q96DX5 294 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 PKP2Q99959 881 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 MROQ9BYG7 248 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 METTL8Q9H825 291 aaKnown RBP13.51□□□□□ -0.25
DDR1-229ENST00000396342 MED20Q9H944 212 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 SIRT7Q9NRC8 400 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 PDP1Q9P0J1 537 aaPredicted RBP13.51□□□□□ -0.25
DDR1-229ENST00000396342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDR1-229ENST00000396342 SF3B6Q9Y3B4 125 aaKnown RBP13.51□□□□□ -0.25
DDR1-229ENST00000396342 TMEM14AQ9Y6G1 99 aa13.51□□□□□ -0.25
DDR1-229ENST00000396342 ZNF816-ZNF321PA0A0X1KG74 233 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 MEIOCA2RUB1 952 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 ACOD1A6NK06 481 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 ACOT8O14734 319 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 NPFFO15130 113 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 MTRF1O75570 445 aaKnown RBP13.5□□□□□ -0.25
DDR1-229ENST00000396342 CST4P01036 141 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 GINS1Q14691 196 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 OCLNQ16625 522 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 SLC35D3Q5M8T2 416 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 ATPAF1Q5TC12 328 aaPredicted RBP13.5□□□□□ -0.25
DDR1-229ENST00000396342 IQCF1Q8N6M8 205 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 OR5T2Q8NGG2 359 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 OR5P3Q8WZ94 311 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 TAF15Q92804 592 aaKnown RBP eCLIP13.5□□□□□ -0.25
DDR1-229ENST00000396342 ITPKCQ96DU7 683 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 DCTN5Q9BTE1 182 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 CHID1Q9BWS9 393 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 SNTG1Q9NSN8 517 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 VPREB3Q9UKI3 123 aa13.5□□□□□ -0.25
DDR1-229ENST00000396342 TCRBV5S2A0A599 114 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 C5orf63A6NC05 138 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 M0R1W7 72 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 KCNAB3O43448 404 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 ANXA8P13928 327 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 ATP6V1B1P15313 513 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 PSMA6P60900 246 aaKnown RBP13.49□□□□□ -0.25
DDR1-229ENST00000396342 GNG3P63215 75 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 HOXA4Q00056 320 aaPredicted RBP13.49□□□□□ -0.25
DDR1-229ENST00000396342 ACSM1Q08AH1 577 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 C2orf68Q2NKX9 166 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 ZNF829Q3KNS6 432 aaPredicted RBP13.49□□□□□ -0.25
DDR1-229ENST00000396342 LINC01590Q5TEZ4 76 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 CCDC197Q8NCU1 140 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 LY6G5BQ8NDX9 201 aa13.49□□□□□ -0.25
DDR1-229ENST00000396342 TMEM185AQ8NFB2 350 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms