RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 RAB11AP62491 216 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 FOXF1Q12946 379 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 SPRED2Q7Z698 418 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 OR10S1Q8NGN2 331 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 OR2I1PQ8NGU4 316 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 ADAMTS18Q8TE60 1221 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 SCAMP4Q969E2 229 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 FBXO32Q969P5 355 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 IL17FQ96PD4 163 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 OR7D2Q96RA2 312 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 ZNF703Q9H7S9 590 aaPredicted RBP11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 ADAP2Q9NPF8 381 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 MRPS28Q9Y2Q9 187 aaKnown RBP11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 WIPF3A6NGB9 483 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 C22orf46C9J442 243 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 ATP1B2P14415 290 aaPredicted RBP11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 ICAM4Q14773 271 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 TMEM176BQ3YBM2 270 aaPredicted RBP11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 CALHM1Q8IU99 346 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 SAXO1Q8IYX7 474 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 VN1R17PQ8TDU5 208 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 CORO2AQ92828 525 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 MRGPRX1Q96LB2 322 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 RAB18Q9NP72 206 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 PLAGL1Q9UM63 463 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 GPR34Q9UPC5 381 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 DOCK9Q9BZ29 2069 aa11.13□□□□□ -0.63
SLC28A1-203ENST00000394573 FEZF1A0PJY2 475 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 H3BNC9 293 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 ACAA2P42765 397 aaKnown RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 HINT1P49773 126 aaPredicted RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 SSBP1Q04837 148 aaKnown RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 TAF10Q12962 218 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 PCK2Q16822 640 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 FBLN7Q53RD9 439 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 OCIAD2Q56VL3 154 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 TMEM128Q5BJH2 165 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 IL22RA1Q8N6P7 574 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 OR2AP1Q8NGE2 309 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 OR56B2PQ8NGI1 322 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 SLC2A12Q8TD20 617 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 OR6C1Q96RD1 312 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 LPAR4Q99677 370 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 PRRX2Q99811 253 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 C16orf70Q9BSU1 422 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 OR10A5Q9H207 317 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 MRM2Q9UI43 246 aaKnown RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 ICAM5Q9UMF0 924 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 CLDN16Q9Y5I7 305 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 MRPS18BQ9Y676 258 aaKnown RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 FANCMQ8IYD8 2048 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 TNFSF12O43508 249 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 KNG1P01042 644 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 SOD2P04179 222 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 AKR1A1P14550 325 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 DUSP3P51452 185 aaPredicted RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 REEP5Q00765 189 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 FZD2Q14332 565 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 FAM220AQ7Z4H9 259 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 ZNF417Q8TAU3 575 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 AQP3Q92482 292 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 THRSPQ92748 146 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 RASD2Q96D21 266 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 MACROD1Q9BQ69 325 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 ZNF552Q9H707 407 aaPredicted RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 APOBEC3BQ9UH17 382 aaKnown RBP11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 OSGIN2Q9Y236 505 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 BRCA2P51587 3418 aa11.12□□□□□ -0.63
SLC28A1-203ENST00000394573 TSPAN6O43657 245 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 TNFSF13O75888 250 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 SFT2D2O95562 160 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 CATP04040 527 aaKnown RBP11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 GNB3P16520 340 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 GLRA1P23415 457 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 CCKARP32238 428 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 CDKN1AP38936 164 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 ZNF709Q8N972 641 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 ABHD3Q8WU67 409 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 MCHR2Q969V1 340 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 TIFAQ96CG3 184 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 LOXL4Q96JB6 756 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 PCGF1Q9BSM1 259 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 PLA2G3Q9NZ20 509 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 SLC17A2O00624 439 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 UPK3AO75631 287 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 CXCR1P25024 350 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 MLF1P58340 268 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 SPSB3Q6PJ21 355 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 LRRC69Q6ZNQ3 347 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 WDFY1Q8IWB7 410 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 OR5T1Q8NG75 326 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 BCL2L2Q92843 193 aaPredicted RBP11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 VAMP8Q9BV40 100 aa11.11□□□□□ -0.63
SLC28A1-203ENST00000394573 CST9LQ9H4G1 147 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms