RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 C2orf68Q2NKX9 166 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 LAMTOR1Q6IAA8 161 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SUMF1Q8NBK3 374 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 LILRB4Q8NHJ6 448 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 KCNG3Q8TAE7 436 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 POM121Q96HA1 1249 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 DPCDQ9BVM2 203 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 DLL4Q9NR61 685 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF701Q9NV72 531 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SLC23A1Q9UHI7 598 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SCP2D1Q9UJQ7 156 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 RHBDD3Q9Y3P4 386 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 TIMM10BQ9Y5J6 103 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 NCKAP5O14513 1909 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 A0A1W2PR80 420 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 KLRC4-KLRK1H3BQV0 150 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 GALR2O43603 387 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 CDC14BO60729 498 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 BPNT1O95861 308 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 CD46P15529 392 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 HTR2BP41595 481 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 PTGFRP43088 359 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 NOVA1P51513 510 aaKnown RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SCRN3Q0VDG4 424 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 RAB12Q6IQ22 244 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SEMA6DQ8NFY4 1073 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 INTS12Q96CB8 462 aaKnown RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 ADGRG7Q96K78 797 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 UQCC2Q9BRT2 126 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 RANBP3Q9H6Z4 567 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SLC17A5Q9NRA2 495 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 DIDO1Q9BTC0 2240 aaKnown RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 TMEM82A0PJX8 343 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 CSTBP04080 98 aaKnown RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SULT1A3P0DMM9 295 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SULT1A4P0DMN0 295 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 LHX2P50458 406 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF260Q3ZCT1 412 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 JMJD6Q6NYC1 403 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 GCNT2Q8N0V5 402 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 ARMC10Q8N2F6 343 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 LPAR5Q9H1C0 372 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 PLEKHA6Q9Y2H5 1048 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 FXYD6-FXYD2A0A087WZ82 144 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 A0A1B0GUH1 482 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 C5orf49A4QMS7 147 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 LDLRAD4O15165 306 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF205O95201 554 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ECH1Q13011 328 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 KCTD9Q7L273 389 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 CPT1CQ8TCG5 803 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ADAMTS17Q8TE56 1095 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 SEC22AQ96IW7 307 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 FXYD6Q9H0Q3 95 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 SLCO5A1Q9H2Y9 848 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 PCSK5Q92824 1860 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 A0A0A6YYD4 124 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 LOC390937A0A1W2PQ73 354 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 FAM221AA4D161 298 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 CCSO14618 274 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 PRAF2O60831 178 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF780AO75290 641 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-203ENST00000394269 SLC22A5O76082 557 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 MGMTP16455 207 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 BAMBIQ13145 260 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 TAF9Q16594 264 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 PLAC9Q5JTB6 97 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 RHOUQ7L0Q8 258 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 URM1Q9BTM9 101 aaKnown RBP9.72□□□□□ -0.85
TCOF1-203ENST00000394269 NOP16Q9Y3C1 178 aaKnown RBP9.72□□□□□ -0.85
TCOF1-203ENST00000394269 MEIKINA0A087WXM9 373 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 IGHV3-64DA0A0J9YX35 117 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ERVH48-1M5A8F1 160 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 CYTIPO60759 359 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 WISP2O76076 250 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF35P13682 527 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 CLDN18P56856 261 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF92Q03936 586 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 RAB35Q15286 201 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF766Q5HY98 468 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 OR8H3Q8N146 312 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 OR4K15Q8NH41 348 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 OR2H1Q9GZK4 316 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 CST11Q9H112 138 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 ICE1Q9Y2F5 2266 aa9.72□□□□□ -0.85
TCOF1-203ENST00000394269 TGM6O95932 706 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 NPY4RP50391 375 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 TMEM50BP56557 158 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 RIPPLY1Q0D2K3 151 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 ATXN7L3Q14CW9 347 aaPredicted RBP9.71□□□□□ -0.85
TCOF1-203ENST00000394269 RSU1Q15404 277 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 MOB3CQ70IA8 216 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 C6orf201Q7Z4U5 140 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 C9orf62Q8N4C0 152 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 CPEB3Q8NE35 698 aaKnown RBP9.71□□□□□ -0.85
TCOF1-203ENST00000394269 OR52H1Q8NGJ2 320 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 APH1AQ96BI3 265 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 PDCD10Q9BUL8 212 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 C1QTNF6Q9BXI9 259 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms