RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 KRT74Q7RTS7 529 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 DEFB107AQ8IZN7 70 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 ARHGAP24Q8N264 748 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 FAM216BQ8N7L0 139 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 RAB3IPQ96QF0 476 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 RTL8AQ9BWD3 113 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 PAPOLGQ9BWT3 736 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 MUC13Q9H3R2 512 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 ZNF319Q9P2F9 582 aa14.35□□□□□ -0.11
SNRPA1-202ENST00000394082 A0A1B0GW55 424 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 NPFFO15130 113 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 GLCEO94923 617 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 DUX4L2P0CJ85 424 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 DUX4L3P0CJ86 424 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 DUX4L4P0CJ87 422 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 DUX4L5P0CJ88 424 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 DUX4L6P0CJ89 424 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 DUX4L7P0CJ90 424 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 GSTT1P30711 240 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 MNAT1P51948 309 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 UBE2E1P51965 193 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 GYS2P54840 703 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 MXRA7P84157 204 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 DUX4L9Q6RFH8 374 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 TIGD4Q8IY51 512 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 FGFRL1Q8N441 504 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 OR6N2Q8NGY6 317 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 OR5P3Q8WZ94 311 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 METTL8Q9H825 291 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 REEP1Q9H902 201 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 ARMC1Q9NVT9 282 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 DUX4Q9UBX2 424 aa14.34□□□□□ -0.11
SNRPA1-202ENST00000394082 TCRBV5S2A0A599 114 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 NKX6-3A6NJ46 265 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 SOX14O95416 240 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 C2orf68Q2NKX9 166 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 OR2T5Q6IEZ7 315 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 ERI1Q8IV48 349 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 PDZD9Q8IXQ8 264 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 ZNF454Q8N9F8 522 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 OR2T29Q8NH02 315 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 OTOSQ8NHW6 89 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 ANGPTL6Q8NI99 470 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 SEH1LQ96EE3 360 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 NIPAL2Q9H841 368 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 SIRT7Q9NRC8 400 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 ARL8BQ9NVJ2 186 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 DNAJB11Q9UBS4 358 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 FBLN5Q9UBX5 448 aa14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 SAMHD1Q9Y3Z3 626 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-202ENST00000394082 ARRDC5A6NEK1 342 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 SIGLEC5O15389 551 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 ACAA1P09110 424 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 H2BFMP0C1H6 154 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 ATP6V1B2P21281 511 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 DCTDP32321 178 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 ELF3P78545 371 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 IKZF1Q13422 519 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 LCN8Q6JVE9 175 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 C11orf88Q6PI97 169 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 CYP2R1Q6VVX0 501 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 PAPD5Q8NDF8 572 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 BEND2Q8NDZ0 799 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 TEX47Q8TBZ9 253 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 PGAM5Q96HS1 289 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 AMELYQ99218 206 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 PPP1R3EQ9H7J1 279 aa14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 SLC25A10Q9UBX3 287 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-202ENST00000394082 ZNF816-ZNF321PA0A0X1KG74 233 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 DCTN3O75935 186 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 PAHP00439 452 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 LYNP07948 512 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 PAICSP22234 425 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 ACKR3P25106 362 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 SAA4P35542 130 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 PRDX4Q13162 271 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 BLMHQ13867 455 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 AANATQ16613 207 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 FAM98BQ52LJ0 330 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 GAFA1Q96PS6 74 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 PKP2Q99959 881 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 WDR13Q9H1Z4 485 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 SEMA6AQ9H2E6 1030 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 VNN3Q9NY84 501 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 DNAJC27Q9NZQ0 273 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 ARL2BPQ9Y2Y0 163 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 U3KQV3 271 aa14.31□□□□□ -0.12
SNRPA1-202ENST00000394082 TRBV23-1A0A0A0MS06 115 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 MEIOCA2RUB1 952 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 ACOD1A6NK06 481 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 FAM183AA6NL82 134 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 ZNF850A8MQ14 1090 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 PRODHO43272 600 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 TSPAN15O95858 294 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 PSMA6P60900 246 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 PPP1R8Q12972 351 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 DGUOKQ16854 277 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 GFOD2Q3B7J2 385 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 PIGWQ7Z7B1 504 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms