RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 APOBEC1P41238 236 aaKnown RBP10.04□□□□□ -0.8
PDCD4-202ENST00000393104 ACY1Q03154 408 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 NSUN5P2Q63ZY6 315 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 Q6ZRG5 221 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 ARRDC1Q8N5I2 433 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 FAM24BQ8N5W8 94 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 METTL27Q8N6F8 245 aaPredicted RBP10.04□□□□□ -0.8
PDCD4-202ENST00000393104 THRSPQ92748 146 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 ARHGAP5-AS1Q96IT6 56 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 C2orf50Q96LR7 162 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 C20orf24Q9BUV8 137 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 KIR2DS5A0A0G2JLQ3 304 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 A0A0G2JNG1 304 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 TMEM269A0A1B0GVZ9 245 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 CDC14CA4D256 554 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 KIR2DS3K7RE56 304 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 EFNA2O43921 213 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 CDC14BO60729 498 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 DANCRP0C864 163 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 HIST1H1DP16402 221 aaKnown RBP10.04□□□□□ -0.8
PDCD4-202ENST00000393104 LAP3P28838 519 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 TMEM33P57088 247 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 HSD11B2P80365 405 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 KIR2DS5Q14953 304 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 OR2B11Q5JQS5 317 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 DEFB123Q8N688 67 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 SLC39A7Q92504 469 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 MUC3AQ02505 3323 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 ZNF729A6NN14 1252 aaPredicted RBP10.04□□□□□ -0.8
PDCD4-202ENST00000393104 SDCBPO00560 298 aaPredicted RBP10.04□□□□□ -0.8
PDCD4-202ENST00000393104 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 FPR2P25090 351 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 CCR4P51679 360 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 RAB5BP61020 215 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 MFAP5Q13361 173 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 FZD2Q14332 565 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 POMZP3Q6PJE2 187 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 C17orf82Q86X59 251 aaPredicted RBP10.04□□□□□ -0.8
PDCD4-202ENST00000393104 AKR7LQ8NHP1 331 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 ADAMTS18Q8TE60 1221 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 MAFIPQ8WZ33 124 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 DNASE2BQ8WZ79 361 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 B3GAT1Q9P2W7 334 aa10.04□□□□□ -0.8
PDCD4-202ENST00000393104 MEGF11A6BM72 1044 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 RAMP1O60894 148 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 YIF1AO95070 293 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 HLA-DQA2P01906 255 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 GAPDHP04406 335 aaKnown RBP10.03□□□□□ -0.8
PDCD4-202ENST00000393104 CCL20P78556 96 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 DAZAP2Q15038 168 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-202ENST00000393104 HAGHQ16775 308 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 Q6ZSR6 202 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 COX15Q7KZN9 410 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 ARL5BQ96KC2 179 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 POMT1Q9Y6A1 747 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 CST4P01036 141 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 BLKP51451 505 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 FAM3AP98173 230 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 ZNF441Q8N8Z8 693 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 UBAC2Q8NBM4 344 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 CHST5Q9GZS9 411 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 BANF2Q9H503 90 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 PRTFDC1Q9NRG1 225 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 HSF4Q9ULV5 492 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 LHFPL6Q9Y693 200 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 MED19A0JLT2 244 aaPredicted RBP10.03□□□□□ -0.8
PDCD4-202ENST00000393104 HTR3BO95264 441 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 IGLV3-1P01715 115 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 HOXB5P09067 269 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 HOXA5P20719 270 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 GALNSP34059 522 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 SULT1A1P50225 295 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 WDR5BQ86VZ2 330 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 TCEAL3Q969E4 200 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 MUCL1Q96DR8 90 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 DGAT2Q96PD7 388 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 MAP3K3Q99759 626 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDCD4-202ENST00000393104 CKLFQ9UBR5 152 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 CYP8B1Q9UNU6 501 aa10.03□□□□□ -0.8
PDCD4-202ENST00000393104 GATCO43716 136 aaKnown RBP10.02□□□□□ -0.8
PDCD4-202ENST00000393104 SFTPBP07988 381 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 RNH1P13489 461 aaKnown RBP10.02□□□□□ -0.8
PDCD4-202ENST00000393104 S100PP25815 95 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 MIDNQ504T8 468 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 Q7L0L9 218 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 SEMA6DQ8NFY4 1073 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 OR13H1Q8NG92 308 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 METTL21AQ8WXB1 218 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 TSLPQ969D9 159 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 SLC25A36Q96CQ1 311 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 RARRES2Q99969 163 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 MRPL13Q9BYD1 178 aaKnown RBP10.02□□□□□ -0.8
PDCD4-202ENST00000393104 PBOV1Q9GZY1 135 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 RPS10P5Q9NQ39 176 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 MCTS1Q9ULC4 181 aaKnown RBP10.02□□□□□ -0.8
PDCD4-202ENST00000393104 DMRT1Q9Y5R6 373 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 SPACA6W5XKT8 324 aa10.02□□□□□ -0.8
PDCD4-202ENST00000393104 SHANK1Q9Y566 2161 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms