RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ANKRD55Q3KP44 614 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 DMRTC2Q8IXT2 367 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF679Q8IYX0 411 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 ZNF565Q8N9K5 539 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 OR10H5Q8NGA6 315 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 OR13C9Q8NGT0 318 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 OR4K15Q8NH41 348 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 RAB3CQ96E17 227 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 MARS2Q96GW9 593 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 CNTD2Q9H8S5 307 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 A0A1W2PQD3 144 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 FHITP49789 147 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 SULT1A1P50225 295 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 POLR2HP52434 150 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 PDZD11Q5EBL8 140 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 PIGQQ9BRB3 760 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 C5orf66Q9H5L9 145 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 CACNA1EQ15878 2313 aa15.65■□□□□ 0.1
SQSTM1-202ENST00000389805 FREM2Q5SZK8 3169 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 H7C1Q1 480 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 LDLRAD4O15165 306 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 TSPAN15O95858 294 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 OPN1LWP04000 364 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 CFPP27918 469 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 RPS10P46783 165 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 NDUFA6P56556 154 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 FMODQ06828 376 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 ZNF519Q8TB69 540 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 TMEM230Q96A57 120 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 MEGF10Q96KG7 1140 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 SPACA5Q96QH8 159 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 SUSD2Q9UGT4 822 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 MRPS17Q9Y2R5 130 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 CXorf65A6NEN9 183 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 A8MVM7 634 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 PLPP3O14495 311 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 SULT1A2P50226 295 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 UNC119Q13432 240 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 KIAA0141Q14154 515 aaPredicted RBP15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 TOMM20Q15388 145 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 SHBQ15464 509 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 MIDNQ504T8 468 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 AWAT2Q6E213 333 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 APCDD1LQ8NCL9 501 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 TMEM104Q8NE00 496 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 AQP10Q96PS8 301 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 TREM2Q9NZC2 230 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 COA3Q9Y2R0 106 aaPredicted RBP15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 PI4KAP42356 2102 aa15.64■□□□□ 0.09
SQSTM1-202ENST00000389805 IFITM10A6NMD0 228 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 DXOO77932 396 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 OR13C7P0DN81 318 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 GNALP38405 381 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 Q3ZCU0 254 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 TMEM128Q5BJH2 165 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 FIP1L1Q6UN15 594 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 NICN1Q9BSH3 213 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 TXNIPQ9H3M7 391 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 LRP12Q9Y561 859 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 MMP24Q9Y5R2 645 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 IGLV1-36A0A0B4J1U3 117 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 SLC34A2O95436 690 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 IGFBP3P17936 291 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 ACTBL2Q562R1 376 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 EIF5AL1Q6IS14 154 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 FAHD2BQ6P2I3 314 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 GRINAQ7Z429 371 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 ST7LQ8TDW4 575 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 OIT3Q8WWZ8 545 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 S100PBPQ96BU1 408 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 FAHD2AQ96GK7 314 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 IER2Q9BTL4 223 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 LOC107986453A0A1B0GWG9 222 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 UMAD1C9J7I0 102 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 ST8SIA5O15466 376 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 CD63P08962 238 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 RIDAP52758 137 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 CLDN6P56747 220 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 SSTP61278 116 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 SLC18B1Q6NT16 456 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 SSX9Q7RTT3 188 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 JSRP1Q96MG2 331 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 FBXO7Q9Y3I1 522 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 FLVCR1Q9Y5Y0 555 aa15.63■□□□□ 0.09
SQSTM1-202ENST00000389805 P2RY10O00398 339 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 C1QL1O75973 258 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 RAB5CP51148 216 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 LCN10Q6JVE6 187 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 NUP54Q7Z3B4 507 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 RNF144BQ7Z419 303 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 GALNTL5Q7Z4T8 443 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 OR52N4Q8NGI2 321 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 DNASE2BQ8WZ79 361 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 C8orf44Q96CB5 159 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 OR6C1Q96RD1 312 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 TAAR9Q96RI9 348 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 CDC6Q99741 560 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 PTGES2Q9H7Z7 377 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 CELSR3Q9NYQ7 3312 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 IGKV1D-43A0A0B4J1Z2 117 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms