RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 CCDC197Q8NCU1 140 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 OR8B12Q8NGG6 310 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 OTOSQ8NHW6 89 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 MICU1Q9BPX6 476 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 TTTY10Q9BZA0 68 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 RNPEPL1Q9HAU8 725 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 KAAG1Q9UBP8 84 aa11.67□□□□□ -0.54
SHOX-202ENST00000381575 PRPF19Q9UMS4 504 aaKnown RBP11.67□□□□□ -0.54
SHOX-202ENST00000381575 PRKDCP78527 4128 aaKnown RBP11.66□□□□□ -0.54
SHOX-202ENST00000381575 ANXA2P2A6NMY6 339 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 AKR7A2O43488 359 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 E2F6O75461 281 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 APOC1P02654 83 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 MRPL3P09001 348 aaKnown RBP11.66□□□□□ -0.54
SHOX-202ENST00000381575 MUC1P15941 1255 aaPredicted RBP11.66□□□□□ -0.54
SHOX-202ENST00000381575 BPIFB3P59826 476 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 RPS7P62081 194 aaKnown RBP11.66□□□□□ -0.54
SHOX-202ENST00000381575 PDCD1Q15116 288 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 PNKDQ8N490 385 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 CSNK2A3Q8NEV1 391 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 SSMEM1Q8WWF3 244 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 HPSE2Q8WWQ2 592 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 H1FXQ92522 213 aaKnown RBP11.66□□□□□ -0.54
SHOX-202ENST00000381575 PIGCQ92535 297 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 FAM71F1Q96KD3 344 aaPredicted RBP11.66□□□□□ -0.54
SHOX-202ENST00000381575 PKP2Q99959 881 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 RTL8AQ9BWD3 113 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 TLNRD1Q9H1K6 362 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 CNTD2Q9H8S5 307 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 SP140LQ9H930 580 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 ZNF391Q9UJN7 358 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 LRP12Q9Y561 859 aa11.66□□□□□ -0.54
SHOX-202ENST00000381575 ARRDC5A6NEK1 342 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 GPR137BO60478 399 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 TIPRLO75663 272 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 ECDO95905 644 aaPredicted RBP11.65□□□□□ -0.55
SHOX-202ENST00000381575 CFL1P23528 166 aaKnown RBP11.65□□□□□ -0.55
SHOX-202ENST00000381575 KRTAP10-3P60369 221 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 CDONQ4KMG0 1287 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 STUMQ69YW2 141 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 SLC36A1Q7Z2H8 476 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 GALNT4Q8N4A0 578 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 OR4F5Q8NH21 305 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 OR5P3Q8WZ94 311 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 SLITRK2Q9H156 845 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 ELL3Q9HB65 397 aaPredicted RBP11.65□□□□□ -0.55
SHOX-202ENST00000381575 BEX1Q9HBH7 125 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 HAO2Q9NYQ3 351 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 MMP24Q9Y5R2 645 aa11.65□□□□□ -0.55
SHOX-202ENST00000381575 PRR32B1ATL7 298 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 M0R129 80 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 NDUFB3O43676 98 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 FAM107AO95990 144 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 OSMP13725 252 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 SLC2A5P22732 501 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 GPM6AP51674 278 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 PSMA6P60900 246 aaKnown RBP11.64□□□□□ -0.55
SHOX-202ENST00000381575 IL5RAQ01344 420 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 APOFQ13790 326 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 CEP78Q5JTW2 689 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 OLFML2AQ68BL7 652 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 C17orf107Q6ZR85 190 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 SPATA24Q86W54 205 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 TMEM86BQ8N661 226 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 LY6G5BQ8NDX9 201 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 RNF170Q96K19 258 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 GAFA1Q96PS6 74 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 RAB3IPQ96QF0 476 aaPredicted RBP11.64□□□□□ -0.55
SHOX-202ENST00000381575 KPTNQ9Y664 436 aa11.64□□□□□ -0.55
SHOX-202ENST00000381575 NKX6-3A6NJ46 265 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 RNASEK-C17orf49H0YIS7 233 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 PRODHO43272 600 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 RHBDL1O75783 438 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 NDUFA7O95182 113 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 TGM4P49221 684 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 CDK5Q00535 292 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 DGUOKQ16854 277 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 LRRC10Q5BKY1 277 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 KRT77Q7Z794 578 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 ZDHHC23Q8IYP9 409 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 Q8N7P7 452 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 FAM81AQ8TBF8 368 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 TBC1D15Q8TC07 691 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 PPP1R14AQ96A00 147 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 DCTN5Q9BTE1 182 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 RGCCQ9H4X1 137 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 ZNF556Q9HAH1 456 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 LAMP5Q9UJQ1 280 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 MPC1Q9Y5U8 109 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 POMT1Q9Y6A1 747 aa11.63□□□□□ -0.55
SHOX-202ENST00000381575 A0A1B0GVI7 797 aa11.62□□□□□ -0.55
SHOX-202ENST00000381575 CLPSL1A2RUU4 121 aa11.62□□□□□ -0.55
SHOX-202ENST00000381575 CCDC182A6NF36 153 aa11.62□□□□□ -0.55
SHOX-202ENST00000381575 AQP12BA6NM10 295 aa11.62□□□□□ -0.55
SHOX-202ENST00000381575 CST4P01036 141 aa11.62□□□□□ -0.55
SHOX-202ENST00000381575 HMGN1P05114 100 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms