RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 STK11Q15831 433 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF529Q6P280 563 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 CARFQ8N187 725 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 MFSD8Q8NHS3 518 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 GNRHR2Q96P88 292 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 RASL10BQ96S79 203 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 TMEM100Q9NV29 134 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 GPR132Q9UNW8 380 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 TRIM61Q5EBN2 209 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 C1QL2Q7Z5L3 287 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 PNLDC1Q8NA58 520 aaKnown RBP14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 OR13G1Q8NGZ3 307 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 ARL11Q969Q4 196 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 RTBDNQ9BSG5 229 aaPredicted RBP14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 NMES1Q9C002 83 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 SEMA5BQ9P283 1151 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 COL5A1P20908 1838 aaPredicted RBP14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 CELSR3Q9NYQ7 3312 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 TRBV6-7A0A0A0MS04 114 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 ARPC4-TTLL3A0A0A6YYG9 625 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 LIPT2A6NK58 231 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 HOXB5P09067 269 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 CLRN1P58418 232 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 S100A10P60903 97 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 PMS2CLQ68D20 193 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 TCEAL6Q6IPX3 200 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 DTX1Q86Y01 620 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 RNF141Q8WVD5 230 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 TCEAL3Q969E4 200 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 LIN37Q96GY3 246 aaPredicted RBP14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 TMEM59Q9BXS4 323 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 ESRP2Q9H6T0 727 aaKnown RBP14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 FLVCR1Q9Y5Y0 555 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 LAMTOR5O43504 91 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 APOBEC1P41238 236 aaKnown RBP14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 ZP4Q12836 540 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 NAA40Q86UY6 237 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 OR5T2Q8NGG2 359 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 GPER1Q99527 375 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 TGIF2Q9GZN2 237 aa14.32□□□□□ -0.12
NKX3-1-201ENST00000380871 FAM186AA6NE01 2351 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 KLK3P07288 261 aaPredicted RBP14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 H2AFB1P0C5Y9 115 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 MUC1P15941 1255 aaPredicted RBP14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 LAP3P28838 519 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 RPS18P62269 152 aaKnown RBP14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 ARFRP1Q13795 201 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 GALNTL5Q7Z4T8 443 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 ST8SIA1Q92185 356 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 METTL8Q9H825 291 aaKnown RBP14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 NDRG3Q9UGV2 375 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 PILRBQ9UKJ0 227 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 ADAMTS9Q9P2N4 1935 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 IGKV1-9A0A0C4DH69 117 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 SFT2D2O95562 160 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 CX3CR1P49238 355 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 AADACL3Q5VUY0 350 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 ETV3LQ6ZN32 361 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 FAM57BQ71RH2 274 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 UEVLDQ8IX04 471 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 CMSS1Q9BQ75 279 aaKnown RBP14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 ACKR4Q9NPB9 350 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 UQCC1Q9NVA1 299 aa14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 NCOA6Q14686 2063 aaPredicted RBP14.31□□□□□ -0.12
NKX3-1-201ENST00000380871 KNG1P01042 644 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 AMY2BP19961 511 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 AKIRIN2Q53H80 203 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 RPL7L1Q6DKI1 246 aaKnown RBP14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 POC1BQ8TC44 478 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 CNTNAP3BQ96NU0 1288 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 MRPL13Q9BYD1 178 aaKnown RBP14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 WIF1Q9Y5W5 379 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 LRP3O75074 770 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 SERPINA5P05154 406 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 TMEM156Q8N614 296 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 OR5H2Q8NGV7 314 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 NUBPLQ8TB37 319 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 SLC22A8Q8TCC7 542 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 PARP12Q9H0J9 701 aaKnown RBP14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF98A6NK75 572 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 SFTPBP07988 381 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 NME2P22392 152 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 LPAR6P43657 344 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 RAET1LQ5VY80 246 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 LPAR3Q9UBY5 353 aa14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 KLF2Q9Y5W3 355 aaPredicted RBP14.3□□□□□ -0.12
NKX3-1-201ENST00000380871 IGLV3-12A0A075B6K2 115 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 KCNJ3P48549 501 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 TAS2R31P59538 309 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 PLPPR5Q32ZL2 321 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 OR2A2Q6IF42 318 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 MISPQ8IVT2 679 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 SPACA9Q96E40 222 aaPredicted RBP14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 NECAB3Q96P71 396 aaPredicted RBP14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 PRO3102Q9H379 93 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 MMP26Q9NRE1 261 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 C19orf25Q9UFG5 118 aaPredicted RBP14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 PMS2P1A4D2B8 440 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF878C9JN71 531 aa14.29□□□□□ -0.12
NKX3-1-201ENST00000380871 C9JQL5 133 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms