RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 RELBQ01201 579 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 LRRC10Q5BKY1 277 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 DUX4L9Q6RFH8 374 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-204ENST00000380749 PDZD9Q8IXQ8 264 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 OR10Z1Q8NGY1 313 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 OTOSQ8NHW6 89 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 DMRTB1Q96MA1 342 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 DNTTIP1Q9H147 329 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 DUX4Q9UBX2 424 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 ZNF391Q9UJN7 358 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 FAM96BQ9Y3D0 163 aa14.22□□□□□ -0.13
HMGN1-204ENST00000380749 BTBD17A6NE02 478 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.21□□□□□ -0.14
HMGN1-204ENST00000380749 GNGT2O14610 69 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 ACOT8O14734 319 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 PRODHO43272 600 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 GPR137BO60478 399 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 IGHV4-59P01825 116 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 FBP1P09467 338 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 POU1F1P28069 291 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 PSMA6P60900 246 aaKnown RBP14.21□□□□□ -0.14
HMGN1-204ENST00000380749 MS4A2Q01362 244 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 GUCA2AQ02747 115 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 PRDX4Q13162 271 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 IKZF1Q13422 519 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 STUMQ69YW2 141 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 FGFRL1Q8N441 504 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 THEM6Q8WUY1 208 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 DPAGT1Q9H3H5 408 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 HAO2Q9NYQ3 351 aa14.21□□□□□ -0.14
HMGN1-204ENST00000380749 DSCAML1Q8TD84 2053 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 M0QZ24 198 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 TIMM23O14925 209 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 SELENOFO60613 162 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 EEF1B2P24534 225 aaKnown RBP14.2□□□□□ -0.14
HMGN1-204ENST00000380749 IER3P46695 156 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 GMFBP60983 142 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 PLBD1Q6P4A8 553 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 METAP1DQ6UB28 335 aaPredicted RBP14.2□□□□□ -0.14
HMGN1-204ENST00000380749 GDPGP1Q6ZNW5 385 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 KCTD8Q6ZWB6 473 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 LY6G5BQ8NDX9 201 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 NPRL2Q8WTW4 380 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 H1FXQ92522 213 aaKnown RBP14.2□□□□□ -0.14
HMGN1-204ENST00000380749 CCT8L2Q96SF2 557 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 PKP2Q99959 881 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 CITED1Q99966 193 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 PPP1R3EQ9H7J1 279 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 NIPAL2Q9H841 368 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 ZNF556Q9HAH1 456 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 SIRT7Q9NRC8 400 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 ZNF319Q9P2F9 582 aa14.2□□□□□ -0.14
HMGN1-204ENST00000380749 ZNF850A8MQ14 1090 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 E2F6O75461 281 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 CST4P01036 141 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 HOXB6P17509 224 aaKnown RBP14.19□□□□□ -0.14
HMGN1-204ENST00000380749 RPS7P62081 194 aaKnown RBP14.19□□□□□ -0.14
HMGN1-204ENST00000380749 ELF3P78545 371 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-204ENST00000380749 SRSF4Q08170 494 aaKnown RBP14.19□□□□□ -0.14
HMGN1-204ENST00000380749 GINS1Q14691 196 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 ATPAF1Q5TC12 328 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-204ENST00000380749 ZDHHC23Q8IYP9 409 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 PAPD5Q8NDF8 572 aaKnown RBP14.19□□□□□ -0.14
HMGN1-204ENST00000380749 C8orf46Q8TAG6 207 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 FAM81AQ8TBF8 368 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 RPL3LQ92901 407 aaKnown RBP14.19□□□□□ -0.14
HMGN1-204ENST00000380749 SEH1LQ96EE3 360 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 DCTN5Q9BTE1 182 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 CHID1Q9BWS9 393 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 TEX12Q9BXU0 123 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 PDP1Q9P0J1 537 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-204ENST00000380749 RNF114Q9Y508 228 aa14.19□□□□□ -0.14
HMGN1-204ENST00000380749 HMGN1P05114 100 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 ACKR3P25106 362 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 TGM4P49221 684 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 DEFA6Q01524 100 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 OCLNQ16625 522 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 MIDNQ504T8 468 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 SLC35D3Q5M8T2 416 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 DHRS7BQ6IAN0 325 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-204ENST00000380749 KRT77Q7Z794 578 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 ADGRG5Q8IZF4 528 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 OR5T2Q8NGG2 359 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 OR8B12Q8NGG6 310 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 OR5P3Q8WZ94 311 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 PIGCQ92535 297 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 MED30Q96HR3 178 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 RNF170Q96K19 258 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 RAB3IPQ96QF0 476 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-204ENST00000380749 HIST1H2AAQ96QV6 131 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 SNTG1Q9NSN8 517 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 ZNRD1Q9P1U0 126 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 LAMP5Q9UJQ1 280 aa14.18□□□□□ -0.14
HMGN1-204ENST00000380749 PAHP00439 452 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 OSMP13725 252 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 SELLP14151 372 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 CCDC197Q8NCU1 140 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 HPSE2Q8WWQ2 592 aa14.17□□□□□ -0.14
HMGN1-204ENST00000380749 GAFA1Q96PS6 74 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms