RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 CFPP27918 469 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 COMPP49747 757 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 GMFBP60983 142 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 C9orf139Q6ZV77 190 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 MEPCEQ7L2J0 689 aaKnown RBP20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 SLC36A1Q7Z2H8 476 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 C11orf53Q8IXP5 236 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 ZNF679Q8IYX0 411 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 SLC25A28Q96A46 364 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 LYZL4Q96KX0 146 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 OR8B4Q96RC9 309 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 SMURF1Q9HCE7 757 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 GTF2A1LQ9UNN4 478 aa20.48■□□□□ 0.87
TNFRSF4-201ENST00000379236 ZNF816-ZNF321PA0A0X1KG74 233 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 ZNF879B4DU55 563 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 P2RY10O00398 339 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 TOX4O94842 621 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 ECDO95905 644 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 ACTR3P61158 418 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 SLX4IPQ5VYV7 408 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 NXNL2Q5VZ03 156 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 AMIGO2Q86SJ2 522 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 GID4Q8IVV7 300 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 TMEM163Q8TC26 289 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 OR5P3Q8WZ94 311 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 RPL3LQ92901 407 aaKnown RBP20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 ZDHHC16Q969W1 377 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 ZNF48Q96MX3 618 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 CCL13Q99616 98 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 PBOV1Q9GZY1 135 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 GABARAPL1Q9H0R8 117 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 KAAG1Q9UBP8 84 aa20.47■□□□□ 0.87
TNFRSF4-201ENST00000379236 A0A0U1RQV5 110 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 NKX6-3A6NJ46 265 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 M0R129 80 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 TNFRSF13BO14836 293 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 DCTDP32321 178 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 CFHR2P36980 270 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 BPIFB3P59826 476 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 WDR38Q5JTN6 314 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 KDM4DQ6B0I6 523 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 BRD3OSQ6XYD6 125 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 BTN2A1Q7KYR7 527 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 SLC35F2Q8IXU6 374 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 OR10Z1Q8NGY1 313 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 LRTOMTQ8WZ04 291 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 C12orf43Q96C57 262 aaKnown RBP20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 FAM71F1Q96KD3 344 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 MNTQ99583 582 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 TLNRD1Q9H1K6 362 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 FAM206AQ9NX38 181 aa20.46■□□□□ 0.87
TNFRSF4-201ENST00000379236 TENM1Q9UKZ4 2725 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 ZAR1LA6NP61 321 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 SRRM5B3KS81 715 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 ZNF670-ZNF695F2Z2N8 137 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 ATP6V1B1P15313 513 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 CXCR4P61073 352 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 ROM1Q03395 351 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 FOXL1Q12952 345 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 C11orf91Q3C1V1 193 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 BCDIN3DQ7Z5W3 292 aaKnown RBP20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 ITFG2Q969R8 447 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 IL4I1Q96RQ9 567 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 COPS3Q9UNS2 423 aa20.45■□□□□ 0.86
TNFRSF4-201ENST00000379236 NDUFB3O43676 98 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 MTRF1O75570 445 aaKnown RBP20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 GPM6AP51674 278 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 RIPPLY1Q0D2K3 151 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 C12orf73Q69YU5 71 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 ZNF322Q6U7Q0 402 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 SCCPDHQ8NBX0 429 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 OR51E1Q8TCB6 317 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 DUS3LQ96G46 650 aaKnown RBP20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 WDFY2Q96P53 400 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 SEMA6AQ9H2E6 1030 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 MOB1AQ9H8S9 216 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 GPR84Q9NQS5 396 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 HAO2Q9NYQ3 351 aa20.44■□□□□ 0.86
TNFRSF4-201ENST00000379236 LOC110117498-PIK3R3F6TDL0 507 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 SFTPBP07988 381 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 GNG3P63215 75 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 IKZF1Q13422 519 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 PDCD1Q15116 288 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 TUSC1Q2TAM9 212 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 AWAT1Q58HT5 328 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 LRRC10Q5BKY1 277 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 CEP78Q5JTW2 689 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 HPSE2Q8WWQ2 592 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 CIB1Q99828 191 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 RIBC2Q9H4K1 309 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 SNTG1Q9NSN8 517 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 NUFIP1Q9UHK0 495 aaKnown RBP20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 ENPP5Q9UJA9 477 aa20.43■□□□□ 0.86
TNFRSF4-201ENST00000379236 AKR7A2O43488 359 aa20.42■□□□□ 0.86
TNFRSF4-201ENST00000379236 RNASE1P07998 156 aaKnown RBP20.42■□□□□ 0.86
TNFRSF4-201ENST00000379236 HKR1P10072 659 aa20.42■□□□□ 0.86
TNFRSF4-201ENST00000379236 EPHA2P29317 976 aa20.42■□□□□ 0.86
TNFRSF4-201ENST00000379236 ARF6P62330 175 aa20.42■□□□□ 0.86
TNFRSF4-201ENST00000379236 SLC9A3R2Q15599 337 aa20.42■□□□□ 0.86
TNFRSF4-201ENST00000379236 BCL2L15Q5TBC7 163 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms