RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 NOP16Q9Y3C1 178 aaKnown RBP11.71□□□□□ -0.54
CCDC3-202ENST00000378839 STMND1H3BQB6 276 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 EIF1BO60739 113 aaKnown RBP11.7□□□□□ -0.54
CCDC3-202ENST00000378839 B3GALNT1O75752 331 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 PTGFRP43088 359 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 GSK3AP49840 483 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 DUSP3P51452 185 aaPredicted RBP11.7□□□□□ -0.54
CCDC3-202ENST00000378839 CAPZA1P52907 286 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 ATP1B3P54709 279 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 CCDC157Q569K6 752 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 GSG1LQ6UXU4 331 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 HOGA1Q86XE5 327 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 FAM89BQ8N5H3 189 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 KCNG3Q8TAE7 436 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 CT55Q8WUE5 264 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 PSMF1Q92530 271 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 PIGTQ969N2 578 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 NECAB3Q96P71 396 aaPredicted RBP11.7□□□□□ -0.54
CCDC3-202ENST00000378839 GPER1Q99527 375 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 PIGLQ9Y2B2 252 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 PCDHGA1Q9Y5H4 931 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 APOC3P02656 99 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 RPA2P15927 270 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 TCN2P20062 427 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 WIPI1Q5MNZ9 446 aaPredicted RBP11.7□□□□□ -0.54
CCDC3-202ENST00000378839 NAXDQ8IW45 347 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 MITD1Q8WV92 249 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 ULBP2Q9BZM5 246 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 FLVCR1Q9Y5Y0 555 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 KCNMB2Q9Y691 235 aa11.7□□□□□ -0.54
CCDC3-202ENST00000378839 IGKV1D-8A0A087WSZ0 117 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ZNHIT1O43257 154 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 DHRS3O75911 302 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CHRM2P08172 466 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 PI3P19957 117 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CRYGSP22914 178 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 BEX5Q5H9J7 111 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ZNF774Q6NX45 483 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 Q6ZSR3 168 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ZDHHC22Q8N966 263 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CASTOR1Q8WTX7 329 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ADGRG7Q96K78 797 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 PIGQQ9BRB3 760 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 C5orf66Q9H5L9 145 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CRLF2Q9HC73 371 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 KIF25Q9UIL4 384 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 GPR179Q6PRD1 2367 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 A0A0U1RQV5 110 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 RNF222A6NCQ9 220 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 M0R135 149 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 RP2O75695 350 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 SPDEFO95238 335 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ACP1P24666 158 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CALCRP30988 508 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 NPY4RP50391 375 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 RPS27AP62979 156 aaKnown RBP11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CSNK2A1P68400 391 aaPredicted RBP11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ECH1Q13011 328 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ZNF799Q96GE5 643 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 NARS2Q96I59 477 aaKnown RBP11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ZNF845Q96IR2 970 aaPredicted RBP11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ALKBH3Q96Q83 286 aaPredicted RBP11.69□□□□□ -0.54
CCDC3-202ENST00000378839 PLEK2Q9NYT0 353 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 LOXL2Q9Y4K0 774 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 IGKV1-27A0A075B6S5 117 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 MFSD2BA6NFX1 497 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 SYNGR3O43761 229 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CXCL13O43927 109 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 VAMP5O95183 116 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 HPNP05981 417 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 FCGR2AP12318 317 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CHAF1BQ13112 559 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 BAMBIQ13145 260 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 GK2Q14410 553 aaPredicted RBP11.69□□□□□ -0.54
CCDC3-202ENST00000378839 CLVS2Q5SYC1 327 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 FAM27BQ5VT28 67 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 ZNF546Q86UE3 836 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 FAM219AQ8IW50 185 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 RELL2Q8NC24 303 aaPredicted RBP11.69□□□□□ -0.54
CCDC3-202ENST00000378839 OR14L1PQ8NHC6 308 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 PPP1R1CQ8WVI7 109 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 NAA11Q9BSU3 229 aaPredicted RBP11.69□□□□□ -0.54
CCDC3-202ENST00000378839 PLEKHA6Q9Y2H5 1048 aa11.69□□□□□ -0.54
CCDC3-202ENST00000378839 DBX1A6NMT0 343 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 MPTX1A8MV57 137 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 B4E171 279 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 LINC01387J3KSC0 135 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 SDCBPO00560 298 aaPredicted RBP11.68□□□□□ -0.54
CCDC3-202ENST00000378839 SERPINA2P20848 420 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 TSPAN7P41732 249 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 RAC3P60763 192 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 IL13RA1P78552 427 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 H3F3CQ6NXT2 135 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 BHLHE23Q8NDY6 225 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 OR51T1Q8NGJ9 327 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 OR6K3Q8NGY3 331 aa11.68□□□□□ -0.54
CCDC3-202ENST00000378839 RBPMSQ93062 196 aaKnown RBP11.68□□□□□ -0.54
CCDC3-202ENST00000378839 OCSTAMPQ9BR26 566 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms