RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 SLC3A1Q07837 685 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 KRTAP27-1Q3LI81 207 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 YIF1BQ5BJH7 314 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 WDR38Q5JTN6 314 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 AVPI1Q5T686 147 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF584Q8IVC4 421 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 ALDH16A1Q8IZ83 802 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 PRSS35Q8N3Z0 413 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.69□□□□□ -0.54
PRPF18-202ENST00000378572 OR1F12Q8NHA8 337 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 SYNPRQ8TBG9 265 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 RPL3LQ92901 407 aaKnown RBP11.69□□□□□ -0.54
PRPF18-202ENST00000378572 YIPF5Q969M3 257 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF75AQ96N20 296 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 COMMD4Q9H0A8 199 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 WNT5BQ9H1J7 359 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 FAM206AQ9NX38 181 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 SSR3Q9UNL2 185 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF281Q9Y2X9 895 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 ZFPL1O95159 310 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 MAGEB1P43366 347 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 KIR3DL2P43630 455 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 CCL8P80075 99 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 FAHD2BQ6P2I3 314 aaPredicted RBP11.69□□□□□ -0.54
PRPF18-202ENST00000378572 PAQR4Q8N4S7 273 aaPredicted RBP11.69□□□□□ -0.54
PRPF18-202ENST00000378572 OR1J2Q8NGS2 313 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 OR5AK2Q8NH90 309 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 SPTSSAQ969W0 71 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 FAHD2AQ96GK7 314 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 CHCHD6Q9BRQ6 235 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 TMED9Q9BVK6 235 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 G6PC2Q9NQR9 355 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 NUFIP1Q9UHK0 495 aaKnown RBP11.69□□□□□ -0.54
PRPF18-202ENST00000378572 OR52A1Q9UKL2 312 aa11.69□□□□□ -0.54
PRPF18-202ENST00000378572 GABRPO00591 440 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 WNT9BO14905 357 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 ISG15P05161 165 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 APLNRP35414 380 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 TMEM33P57088 247 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 ERVS71-1P61550 626 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 FABP5Q01469 135 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 MFGE8Q08431 387 aaPredicted RBP11.68□□□□□ -0.54
PRPF18-202ENST00000378572 RSPO1Q2MKA7 263 aaPredicted RBP11.68□□□□□ -0.54
PRPF18-202ENST00000378572 PABPC1L2AQ5JQF8 200 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF774Q6NX45 483 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 DRAM2Q6UX65 266 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 ELMOD2Q8IZ81 293 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 PHYHIPQ92561 330 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 THRSPQ92748 146 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 TMEM203Q969S6 136 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 PDCD1LG2Q9BQ51 273 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 DECR2Q9NUI1 292 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 GSTK1Q9Y2Q3 226 aa11.68□□□□□ -0.54
PRPF18-202ENST00000378572 M0R135 149 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 GATBO75879 557 aaKnown RBP11.67□□□□□ -0.54
PRPF18-202ENST00000378572 UBCP0CG48 685 aaKnown RBP11.67□□□□□ -0.54
PRPF18-202ENST00000378572 RAD52P43351 418 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 HTR5AP47898 357 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 CX3CR1P49238 355 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 PRKXP51817 358 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 TPTEP56180 551 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 RPS11P62280 158 aaKnown RBP eCLIP11.67□□□□□ -0.54
PRPF18-202ENST00000378572 CNPY1Q3B7I2 92 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 PCGF3Q3KNV8 242 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 TMEM91Q6ZNR0 172 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 PRSS45Q7RTY3 260 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF283Q8N7M2 679 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 AKR7LQ8NHP1 331 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 ABHD4Q8TB40 342 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF418Q8TF45 676 aaPredicted RBP11.67□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF799Q96GE5 643 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 DCLRE1CQ96SD1 692 aaKnown RBP11.67□□□□□ -0.54
PRPF18-202ENST00000378572 CENPOQ9BU64 300 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 SP140LQ9H930 580 aa11.67□□□□□ -0.54
PRPF18-202ENST00000378572 EXOSC4Q9NPD3 245 aaKnown RBP11.67□□□□□ -0.54
PRPF18-202ENST00000378572 TXNL4BQ9NX01 149 aaKnown RBP11.67□□□□□ -0.54
PRPF18-202ENST00000378572 LOC100506127A0A0U1RQW1 187 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 C17orf100A8MU93 164 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF121P58317 390 aaPredicted RBP11.66□□□□□ -0.54
PRPF18-202ENST00000378572 NCS1P62166 190 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 MRPS11P82912 194 aaKnown RBP11.66□□□□□ -0.54
PRPF18-202ENST00000378572 BCL2L15Q5TBC7 163 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 TMEM244Q5VVB8 128 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 UNQ9370/PRO34162Q6UXP9 181 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 ZNF676Q8N7Q3 588 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 OR1J1Q8NGS3 322 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 RGP1Q92546 391 aaPredicted RBP11.66□□□□□ -0.54
PRPF18-202ENST00000378572 RAB39BQ96DA2 213 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 BCL2L14Q9BZR8 327 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 PBOV1Q9GZY1 135 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 SLC22A13Q9Y226 551 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 TRAV20A0A0B4J274 112 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 IGHV1-69-2A0A0G2JMI3 117 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 F5H5K5 113 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 VENTXO95231 258 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 TTRP02766 147 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 ACSM4P0C7M7 580 aa11.66□□□□□ -0.54
PRPF18-202ENST00000378572 VBP1P61758 197 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms