RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CD22P20273 847 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 TBXA2RP21731 343 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF121P58317 390 aaPredicted RBP10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 SNRPEP62304 92 aaKnown RBP10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 SCN7AQ01118 1682 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 TMEM18Q96B42 140 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 SIGLEC11Q96RL6 698 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 TNRC6CQ9HCJ0 1690 aaKnown RBP10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 DLL4Q9NR61 685 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 AQP7P3A6NL99 342 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 C9orf172C9J069 976 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 KCNAB3O43448 404 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 XRCC2O43543 280 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 COL9A1P20849 921 aa10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 CDC34P49427 236 aaPredicted RBP10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 DND1Q8IYX4 353 aaKnown RBP10.8□□□□□ -0.68
PCDHA9-201ENST00000378122 SEC14L6B5MCN3 397 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 RAB5AP20339 215 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 OR1C1Q15619 314 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 GALNT16Q8N428 558 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 KISS1RQ969F8 398 aaPredicted RBP10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 TIMM10BQ9Y5J6 103 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 M0QZ24 198 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 M0R135 149 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 PHOX2AO14813 284 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 KRTDAPP60985 99 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 GPX8Q8TED1 209 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF799Q96GE5 643 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 SMIM7Q9BQ49 75 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 NAGKQ9UJ70 344 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF320A2RRD8 509 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 PRR35P0CG20 571 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 GLB1P16278 677 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 MYO7AQ13402 2215 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 SLC22A20A6NK97 555 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 FAM157AC9JC47 383 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 SH2D1BO14796 132 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 ASCL1P50553 236 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 VAMP3Q15836 100 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 SSX7Q7RTT5 188 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 DOK1Q99704 481 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 MEIKINA0A087WXM9 373 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 TMEM272A0A1B0GTI8 110 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 LEUTXA8MZ59 168 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 ST6GAL1P15907 406 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 ACOT6Q3I5F7 207 aaPredicted RBP10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 LRRTM1Q86UE6 522 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 OR2G2Q8NGZ5 317 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 OR5B3Q8NH48 314 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 TXNIPQ9H3M7 391 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 PARD6AQ9NPB6 346 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 POMT1Q9Y6A1 747 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF205O95201 554 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 MBP02144 154 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 IL5P05113 134 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 KIRREL2Q6UWL6 708 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF429Q86V71 674 aa10.79□□□□□ -0.68
PCDHA9-201ENST00000378122 AHDC1Q5TGY3 1603 aaPredicted RBP10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 RAB13P51153 203 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 MOB3BQ86TA1 216 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 SLC25A43Q8WUT9 341 aaPredicted RBP10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 CYSLTR2Q9NS75 346 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 CTXN2P0C2S0 81 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 FGF7P21781 194 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 PMP22Q01453 160 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 SSX1Q16384 188 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 PCK2Q16822 640 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 GSG1Q2KHT4 349 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 MIDNQ504T8 468 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 TMEM211Q6ICI0 200 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 RDH5Q92781 318 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 CXorf58Q96LI9 332 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 RIMS4Q9H426 269 aaPredicted RBP10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF586Q9NXT0 402 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 PMS2P1A4D2B8 440 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 GNG10P50151 68 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 GFERP55789 205 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 OR2W3Q7Z3T1 314 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 OXGR1Q96P68 337 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 K7EQM0 130 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 GPR12P47775 334 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 RPS23P62266 143 aaKnown RBP10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 CNRIP1Q96F85 164 aaPredicted RBP10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 SELEP16581 610 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 RPS16P62249 146 aaKnown RBP10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 CDK5Q00535 292 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 FABP9Q0Z7S8 132 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 NHLRC1Q6VVB1 395 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 Q6ZNB5 142 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 EXTL1Q92935 676 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 LINC00052Q96N35 136 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 LAMP3Q9UQV4 416 aa10.78□□□□□ -0.68
PCDHA9-201ENST00000378122 A0A1W2PPC4 97 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 A0A1W2PPQ1 181 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 HSPB2A8KAH6 182 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 OPN1MWP04001 364 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 OPN1MW2P0DN77 364 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 OPN1MW3P0DN78 364 aa10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 SSBP1Q04837 148 aaKnown RBP10.77□□□□□ -0.68
PCDHA9-201ENST00000378122 ENDOGQ14249 297 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms