RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PKP2Q99959 881 aa14.02□□□□□ -0.17
HMGN4-201ENST00000377575 NUDT16L1Q9BRJ7 211 aaKnown RBP14.02□□□□□ -0.17
HMGN4-201ENST00000377575 TLNRD1Q9H1K6 362 aa14.02□□□□□ -0.17
HMGN4-201ENST00000377575 NUFIP1Q9UHK0 495 aaKnown RBP14.02□□□□□ -0.17
HMGN4-201ENST00000377575 PRR32B1ATL7 298 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 LOC110117498-PIK3R3F6TDL0 507 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 EBAG9O00559 213 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 GYPAP02724 150 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 MUC1P15941 1255 aaPredicted RBP14.01□□□□□ -0.17
HMGN4-201ENST00000377575 EGR1P18146 543 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 HTR1FP30939 366 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 CSNK2BP67870 215 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 MICBQ29980 383 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 CD276Q5ZPR3 534 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 ZNF841Q6ZN19 808 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 KCTD8Q6ZWB6 473 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 THAP5Q7Z6K1 395 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 FAM90A1Q86YD7 464 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 C11orf53Q8IXP5 236 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 OR8J1Q8NGP2 316 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 OR5P3Q8WZ94 311 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 RFKQ969G6 155 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 DACT3Q96B18 629 aaPredicted RBP14.01□□□□□ -0.17
HMGN4-201ENST00000377575 PPP1R3EQ9H7J1 279 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 CTSZQ9UBR2 303 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 GTF2A1LQ9UNN4 478 aa14.01□□□□□ -0.17
HMGN4-201ENST00000377575 KIR2DS1A0A191URI9 304 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 TRIM77I1YAP6 450 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 CDIPTO14735 213 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 MTRF1O75570 445 aaKnown RBP14□□□□□ -0.17
HMGN4-201ENST00000377575 POLR2IP36954 125 aaKnown RBP14□□□□□ -0.17
HMGN4-201ENST00000377575 CFHR2P36980 270 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 MFGE8Q08431 387 aaPredicted RBP14□□□□□ -0.17
HMGN4-201ENST00000377575 TMED1Q13445 227 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 BCL2L15Q5TBC7 163 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 ZBTB37Q5TC79 503 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 RBMS3Q6XE24 437 aaKnown RBP14□□□□□ -0.17
HMGN4-201ENST00000377575 OR10Z1Q8NGY1 313 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 OR51E1Q8TCB6 317 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 HPSE2Q8WWQ2 592 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 C12orf43Q96C57 262 aaKnown RBP14□□□□□ -0.17
HMGN4-201ENST00000377575 RNF170Q96K19 258 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 FAM71F1Q96KD3 344 aaPredicted RBP14□□□□□ -0.17
HMGN4-201ENST00000377575 GPR84Q9NQS5 396 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 IMPAD1Q9NX62 359 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 R4GMQ9 66 aa14□□□□□ -0.17
HMGN4-201ENST00000377575 IGHV3OR15-7A0A075B7D8 119 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 SRRM5B3KS81 715 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 H3BNX3 289 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 EI24O14681 340 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 TMPRSS2O15393 492 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 DHRS3O75911 302 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 IGLV3-1P01715 115 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 ALPLP05186 524 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 KRT8P05787 483 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 RIPPLY1Q0D2K3 151 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 C11orf91Q3C1V1 193 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 KLF17Q5JT82 389 aaPredicted RBP13.99□□□□□ -0.17
HMGN4-201ENST00000377575 KRT74Q7RTS7 529 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.99□□□□□ -0.17
HMGN4-201ENST00000377575 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 UPRTQ96BW1 309 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 RAB3IPQ96QF0 476 aaPredicted RBP13.99□□□□□ -0.17
HMGN4-201ENST00000377575 APOL4Q9BPW4 351 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 USE1Q9NZ43 259 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 KAAG1Q9UBP8 84 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 ENPP5Q9UJA9 477 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 SNX5Q9Y5X3 404 aa13.99□□□□□ -0.17
HMGN4-201ENST00000377575 ANK2Q01484 3957 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 C22orf46C9J442 243 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 TNFRSF13BO14836 293 aaPredicted RBP13.98□□□□□ -0.17
HMGN4-201ENST00000377575 SRSF10O75494 262 aaKnown RBP13.98□□□□□ -0.17
HMGN4-201ENST00000377575 TTRP02766 147 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 LIPFP07098 398 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 OR2T7P0C7T2 308 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 ATP6V1E1P36543 226 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 ALDH3A2P51648 485 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 GPM6AP51674 278 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 GNG3P63215 75 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 ACTG1P63261 375 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 CEACAM21Q3KPI0 293 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 FAM76BQ5HYJ3 339 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 SLC36A1Q7Z2H8 476 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 PNLDC1Q8NA58 520 aaKnown RBP13.98□□□□□ -0.17
HMGN4-201ENST00000377575 SCCPDHQ8NBX0 429 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 OR2T27Q8NH04 317 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 TRUB1Q8WWH5 349 aaKnown RBP13.98□□□□□ -0.17
HMGN4-201ENST00000377575 RPL3LQ92901 407 aaKnown RBP13.98□□□□□ -0.17
HMGN4-201ENST00000377575 TBX5Q99593 518 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 MS4A7Q9GZW8 240 aaPredicted RBP13.98□□□□□ -0.17
HMGN4-201ENST00000377575 SMURF1Q9HCE7 757 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 DNAJB11Q9UBS4 358 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 MRM2Q9UI43 246 aaKnown RBP13.98□□□□□ -0.17
HMGN4-201ENST00000377575 OR52A1Q9UKL2 312 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 PIGLQ9Y2B2 252 aa13.98□□□□□ -0.17
HMGN4-201ENST00000377575 TRAV40A0A0B4J280 105 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 NKX6-3A6NJ46 265 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 OR5B21A6NL26 309 aa13.97□□□□□ -0.17
HMGN4-201ENST00000377575 ECDO95905 644 aaPredicted RBP13.97□□□□□ -0.17
HMGN4-201ENST00000377575 FAHP16930 419 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms