RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 RPUSD1Q9UJJ7 312 aaKnown RBP17.39■□□□□ 0.37
VSX1-201ENST00000376707 POMT1Q9Y6A1 747 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 CDIPTO14735 213 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 SELENOFO60613 162 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 KNG1P01042 644 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 LYNP07948 512 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 BNIP1Q12981 228 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 FAHD1Q6P587 224 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 GALNT4Q8N4A0 578 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 SCCPDHQ8NBX0 429 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 THEM6Q8WUY1 208 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 UTP4Q969X6 686 aaKnown RBP17.38■□□□□ 0.37
VSX1-201ENST00000376707 RTL8AQ9BWD3 113 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 TEX12Q9BXU0 123 aa17.38■□□□□ 0.37
VSX1-201ENST00000376707 A0A1B0GW55 424 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 DUX4L2P0CJ85 424 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 DUX4L3P0CJ86 424 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 DUX4L4P0CJ87 422 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 DUX4L5P0CJ88 424 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 DUX4L6P0CJ89 424 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 DUX4L7P0CJ90 424 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 ELF3P78545 371 aaPredicted RBP17.37■□□□□ 0.37
VSX1-201ENST00000376707 CDONQ4KMG0 1287 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 TMEM236Q5W0B7 351 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 DUX4L9Q6RFH8 374 aaPredicted RBP17.37■□□□□ 0.37
VSX1-201ENST00000376707 TREML4Q6UXN2 200 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 C17orf107Q6ZR85 190 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 FGFRL1Q8N441 504 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 FAM216BQ8N7L0 139 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 BBS1Q8NFJ9 593 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 TBC1D15Q8TC07 691 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 C12orf43Q96C57 262 aaKnown RBP17.37■□□□□ 0.37
VSX1-201ENST00000376707 ITPKCQ96DU7 683 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 ONECUT1Q9UBC0 465 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 DUX4Q9UBX2 424 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 MPC1Q9Y5U8 109 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 KPTNQ9Y664 436 aa17.37■□□□□ 0.37
VSX1-201ENST00000376707 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.36■□□□□ 0.37
VSX1-201ENST00000376707 NDUFB3O43676 98 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 GMFBP60983 142 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 PRDX4Q13162 271 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 VMO1Q7Z5L0 202 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 PDZD9Q8IXQ8 264 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 KIR3DL3Q8N743 410 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 SEH1LQ96EE3 360 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 TLNRD1Q9H1K6 362 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 NIPAL2Q9H841 368 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 ABCB9Q9NP78 766 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 PAPOLBQ9NRJ5 636 aaKnown RBP17.36■□□□□ 0.37
VSX1-201ENST00000376707 C1RLQ9NZP8 487 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 DNAJB11Q9UBS4 358 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 KLHDC2Q9Y2U9 406 aa17.36■□□□□ 0.37
VSX1-201ENST00000376707 A0A0U1RQK1 487 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 A0A1B0GVI7 797 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 ZNF850A8MQ14 1090 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 NDUFA7O95182 113 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 ALOX5APP20292 161 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 CRISP1P54107 249 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 PSMA6P60900 246 aaKnown RBP17.35■□□□□ 0.37
VSX1-201ENST00000376707 RPS7P62081 194 aaKnown RBP17.35■□□□□ 0.37
VSX1-201ENST00000376707 IKZF1Q13422 519 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 KCTD8Q6ZWB6 473 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 CMTM4Q8IZR5 234 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 HAO2Q9NYQ3 351 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 MEGF8Q7Z7M0 2845 aa17.35■□□□□ 0.37
VSX1-201ENST00000376707 TMEM210A6NLX4 147 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 GPR37O15354 613 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 ACKR3P25106 362 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 DAPP51397 102 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 RPL15P61313 204 aaKnown RBP17.34■□□□□ 0.37
VSX1-201ENST00000376707 RELBQ01201 579 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 APOFQ13790 326 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 SNAPC1Q16533 368 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 LRRC10Q5BKY1 277 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 OLFML2AQ68BL7 652 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 STUMQ69YW2 141 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 LY6G5BQ8NDX9 201 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 OR5T2Q8NGG2 359 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 WFDC12Q8WWY7 111 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 OR5P3Q8WZ94 311 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 PIGCQ92535 297 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 DYRK2Q92630 601 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 RPL3LQ92901 407 aaKnown RBP17.34■□□□□ 0.37
VSX1-201ENST00000376707 PKP2Q99959 881 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 YIPF3Q9GZM5 350 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 ZNF391Q9UJN7 358 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 FAM96BQ9Y3D0 163 aa17.34■□□□□ 0.37
VSX1-201ENST00000376707 NKX6-3A6NJ46 265 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 CST4P01036 141 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 IGHV4-59P01825 116 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 ESRRGP62508 458 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 PTGES3Q15185 160 aaKnown RBP17.33■□□□□ 0.36
VSX1-201ENST00000376707 ATPAF1Q5TC12 328 aaPredicted RBP17.33■□□□□ 0.36
VSX1-201ENST00000376707 LDLRAD3Q86YD5 345 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 OR8B12Q8NGG6 310 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 OR10Z1Q8NGY1 313 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 OR5K1Q8NHB7 308 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 H1FXQ92522 213 aaKnown RBP17.33■□□□□ 0.36
VSX1-201ENST00000376707 RNF170Q96K19 258 aa17.33■□□□□ 0.36
VSX1-201ENST00000376707 DMRTB1Q96MA1 342 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms