RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 LMO3Q8TAP4 145 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 SLC25A33Q9BSK2 321 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 MAGT1Q9H0U3 335 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 IGSF23A1L1A6 192 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 SOX15O60248 233 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 HAND1O96004 215 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 C11orf91Q3C1V1 193 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 LILRA2Q8N149 483 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM251Q8N6I4 163 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 IL22RA2Q969J5 263 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 Q9N2K0 584 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 PITPNC1Q9UKF7 332 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 ARRDC5A6NEK1 342 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 OPRM1P35372 400 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 FAM74A3Q4VXF1 159 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 NIPSNAP1Q9BPW8 284 aa10.55□□□□□ -0.72
VPS13A-205ENST00000376636 SH2D2AQ9NP31 389 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 PIGAP37287 484 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 OR4A47Q6IF82 309 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF738Q8NE65 137 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 MARCH1Q8TCQ1 289 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 ISL2Q96A47 359 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 GLIPR2Q9H4G4 154 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 ABCA1O95477 2261 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 FUT6P51993 359 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 SNRPEP62304 92 aaKnown RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 PIANPQ8IYJ0 282 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 FAM131CQ96AQ9 280 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 MRAP2Q96G30 205 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 CHRNA10Q9GZZ6 450 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 MMP24Q9Y5R2 645 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 ATP23Q9Y6H3 246 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 LRRC37A3O60309 1634 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM30CPA0ZSE6 113 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 DSCR3O14972 297 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 AKR7A3O95154 331 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 GUSBP08236 651 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 TM4SF1P30408 202 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 CLDN18P56856 261 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 IGSF11Q5DX21 431 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 OR2G2Q8NGZ5 317 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF346Q9UL40 294 aaKnown RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 A0A1B0GUL6 1792 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 M0QZQ0 153 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 CD96P40200 585 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 MAT1AQ00266 395 aaKnown RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 THOC3Q96J01 351 aaKnown RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 FZD9O00144 591 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 RPS4Y1P22090 263 aaKnown RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 OR1D5P58170 312 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 LIPNQ5VXI9 398 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 TRAV1-2A0A0B4J238 106 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 SMIM4Q8WVI0 70 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 IL2RAP01589 272 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 HIST1H1CP16403 213 aaKnown RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 SUCLG1P53597 346 aaKnown RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 MRPS21P82921 87 aaKnown RBP10.54□□□□□ -0.72
VPS13A-205ENST00000376636 MARCH3Q86UD3 253 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 TGIF2LYQ8IUE0 185 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 SYS1Q8N2H4 156 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 RDH5Q92781 318 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 MISP3Q96FF7 219 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 PRO1933Q9H354 126 aa10.54□□□□□ -0.72
VPS13A-205ENST00000376636 WTIPA6NIX2 430 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CD3DP04234 171 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 PGA4P0DJD7 388 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 PGA5P0DJD9 388 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 PLP1P60201 277 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM229BQ8NBD8 167 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 OR5R1Q8NH85 324 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 PP6455Q8WZ26 134 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 COL25A1Q9BXS0 654 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-205ENST00000376636 S1PR5Q9H228 398 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ONECUT1Q9UBC0 465 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 PROCRQ9UNN8 238 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF789Q5FWF6 425 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 FIGNL2A6NMB9 653 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CTNSO60931 367 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 SLC6A1P30531 599 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 BSGP35613 385 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CAMPP49913 170 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 METAP1P53582 386 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 GPNMBQ14956 572 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 TBC1D26Q86UD7 250 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 C5orf17Q8NAS9 161 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 MFSD2BA6NFX1 497 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 SDCBPO00560 298 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-205ENST00000376636 TNFRSF1AP19438 455 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 FPR2P25090 351 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CTBSQ01459 385 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 SELENBP1Q13228 472 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 SIX1Q15475 284 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-205ENST00000376636 IZUMO4Q1ZYL8 232 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF766Q5HY98 468 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 OR2T10Q8NGZ9 312 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 MS4A8Q9BY19 250 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 CMC2Q9NRP2 79 aa10.53□□□□□ -0.72
VPS13A-205ENST00000376636 MYO5AQ9Y4I1 1855 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms