RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OR8B12Q8NGG6 310 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 OR13C9Q8NGT0 318 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 CT55Q8WUE5 264 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 NKD1Q969G9 470 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 NAA11Q9BSU3 229 aaPredicted RBP12.31□□□□□ -0.44
MSH5-202ENST00000375740 FAM96BQ9Y3D0 163 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 A0A0G2JMM0 328 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 A0A1W2PPB8 328 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 A0A1W2PRS3 328 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 KIR3DP1A8MWS1 328 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 TNFSF11O14788 317 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 BCL2L11O43521 198 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 CSNK1A1P48729 337 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 STEAP1BQ6NZ63 245 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 UQCC3Q6UW78 93 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 COMMD2Q86X83 199 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 STEAP2Q8NFT2 490 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 PTX4Q96A99 478 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 TMEM41AQ96HV5 264 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 COLCA2A8K830 154 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 NPIPA2E9PIF3 369 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 NPIPA3F8WFD2 350 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 OR4E1P0C645 316 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 FOSL1P15407 271 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 ABOP16442 354 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 CX3CR1P49238 355 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 ATP1B3P54709 279 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 RAC1P63000 192 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 SSBP1Q04837 148 aaKnown RBP12.3□□□□□ -0.44
MSH5-202ENST00000375740 LIN54Q6MZP7 749 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 ABHD12BQ7Z5M8 362 aaPredicted RBP12.3□□□□□ -0.44
MSH5-202ENST00000375740 GABRG1Q8N1C3 465 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
MSH5-202ENST00000375740 ACBD4Q8NC06 268 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 OR9K2Q8NGE7 335 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 TMEM54Q969K7 222 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 SGCZQ96LD1 299 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 MOB1AQ9H8S9 216 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 GHRLQ9UBU3 117 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 RAB22AQ9UL26 194 aa12.3□□□□□ -0.44
MSH5-202ENST00000375740 FAM25EA8MYX2 175 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 CD63P08962 238 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 ZNF20P17024 532 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 RAB6AP20340 208 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 CSNK2A1P68400 391 aaPredicted RBP12.29□□□□□ -0.44
MSH5-202ENST00000375740 C10orf91Q5T1B1 145 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 ZNF529Q6P280 563 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 RNF144BQ7Z419 303 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 LILRB2Q8N423 598 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 SLC22A24Q8N4F4 322 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 ZNF283Q8N7M2 679 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 PIGQQ9BRB3 760 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 TREM1Q9NP99 234 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 ACKR4Q9NPB9 350 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 GPR84Q9NQS5 396 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 FARSAQ9Y285 508 aaKnown RBP12.29□□□□□ -0.44
MSH5-202ENST00000375740 WIPF3A6NGB9 483 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 C5orf52A6NGY3 159 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 F5H0A9 414 aaPredicted RBP12.29□□□□□ -0.44
MSH5-202ENST00000375740 VAMP5O95183 116 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 FARS2O95363 451 aaKnown RBP12.29□□□□□ -0.44
MSH5-202ENST00000375740 P04436 131 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 ZNF883P0CG24 379 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 ZNF17P17021 662 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 AKR1C3P42330 323 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 GUCA1AP43080 201 aaPredicted RBP12.29□□□□□ -0.44
MSH5-202ENST00000375740 ACTBP60709 375 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 ACTG1P63261 375 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 ECH1Q13011 328 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 AKIRIN2Q53H80 203 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 C11orf87Q6NUJ2 197 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 FAM57BQ71RH2 274 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 YRDCQ86U90 279 aaKnown RBP12.29□□□□□ -0.44
MSH5-202ENST00000375740 FAM71F1Q96KD3 344 aaPredicted RBP12.29□□□□□ -0.44
MSH5-202ENST00000375740 SRXN1Q9BYN0 137 aa12.29□□□□□ -0.44
MSH5-202ENST00000375740 CARHSP1Q9Y2V2 147 aaKnown RBP12.29□□□□□ -0.44
MSH5-202ENST00000375740 A0A0A6YYH2 397 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 OR14I1A6ND48 311 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 METTL21EPA6NDL7 271 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 A6NJ64 397 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 ZNF705EA8MWA4 302 aaPredicted RBP12.28□□□□□ -0.44
MSH5-202ENST00000375740 IGHV2-70P01814 119 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 SMIM6P0DI80 62 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 MSR1P21757 451 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 DLSTP36957 453 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 B3GALT5-AS1P59052 145 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 TAS2R19P59542 299 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 LSM6P62312 80 aaKnown RBP12.28□□□□□ -0.44
MSH5-202ENST00000375740 CHAF1BQ13112 559 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 UNC119Q13432 240 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 SSPNQ14714 243 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 NAA40Q86UY6 237 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 ZIC4Q8N9L1 334 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 TMEM229BQ8NBD8 167 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 PPP1R1CQ8WVI7 109 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 FAM46BQ96A09 425 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 ZNF775Q96BV0 537 aaPredicted RBP12.28□□□□□ -0.44
MSH5-202ENST00000375740 SPACA5Q96QH8 159 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 RBM24Q9BX46 236 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms