RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 POLR1DQ9Y2S0 133 aa9.81□□□□□ -0.84
CCDC40-203ENST00000374877 CNTRLQ7Z7A1 2325 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 A0A1W2PPE3 182 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 C2orf72A6NCS6 295 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 ALG1L2C9J202 215 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 M0R036 132 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 CRTAPO75718 401 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-203ENST00000374877 RAD51DO75771 328 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 CFIP05156 583 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 CD5P06127 495 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 HCKP08631 526 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 FPR2P25090 351 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 POLR2GP62487 172 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC40-203ENST00000374877 FABP9Q0Z7S8 132 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 GRINAQ7Z429 371 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 RNF133Q8WVZ7 376 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 OIT3Q8WWZ8 545 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 ARHGAP5-AS1Q96IT6 56 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 RTBDNQ9BSG5 229 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-203ENST00000374877 RNF122Q9H9V4 155 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 SEMA5BQ9P283 1151 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 IGHV1OR21-1A0A087WYE8 117 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 C5orf52A6NGY3 159 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 A6NIZ1 184 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 TXNL1O43396 289 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 DUX1O43812 170 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 DAOP14920 347 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 DVL1P1P54792 670 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-203ENST00000374877 RAP1BP61224 184 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 RAP1AP62834 184 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 CSNK2A1P68400 391 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-203ENST00000374877 VAX1Q5SQQ9 334 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 DEGS2Q6QHC5 323 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 ABHD12BQ7Z5M8 362 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-203ENST00000374877 LINC00469Q8N7U9 141 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 POC1AQ8NBT0 407 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 CSNK2A3Q8NEV1 391 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 OR13G1Q8NGZ3 307 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 C11orf40Q8WZ69 217 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 ARL5BQ96KC2 179 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 FAM71F1Q96KD3 344 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-203ENST00000374877 SCGB3A2Q96PL1 93 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 NUDT22Q9BRQ3 303 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 SOX7Q9BT81 388 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 EHFQ9NZC4 300 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 DNAJB11Q9UBS4 358 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 MEMO1Q9Y316 297 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 SPAG17Q6Q759 2223 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 RTTNQ86VV8 2226 aa9.8□□□□□ -0.84
CCDC40-203ENST00000374877 A6NLC8 198 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 K7EPK0 472 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 DDAH2O95865 285 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 IGHMP01871 453 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 GSTP1P09211 210 aaKnown RBP9.79□□□□□ -0.84
CCDC40-203ENST00000374877 LYL1P12980 280 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 FOLR2P14207 255 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 SULT1A2P50226 295 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 P2RY4P51582 365 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 TSC22D1Q15714 1073 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 ACTBL2Q562R1 376 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 LCN10Q6JVE6 187 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 BTNL8Q6UX41 500 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 C9orf40Q8IXQ3 194 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 FAM71E2Q8N5Q1 922 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF721Q8TF20 911 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 ASB10Q8WXI3 467 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF285Q96NJ3 590 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 TGM7Q96PF1 710 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 LANCL2Q9NS86 450 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 CACFD1Q9UGQ2 172 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 GALR2O43603 387 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-203ENST00000374877 CDC14BO60729 498 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 HKR1P10072 659 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 RPL12P30050 165 aaKnown RBP9.79□□□□□ -0.84
CCDC40-203ENST00000374877 GSK3AP49840 483 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 TMEM50BP56557 158 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 IAH1Q2TAA2 248 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-203ENST00000374877 AWAT1Q58HT5 328 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 PLXDC1Q8IUK5 500 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 OR5D18Q8NGL1 313 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 RGCCQ9H4X1 137 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 FBXL17Q9UF56 701 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 KPTNQ9Y664 436 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 MS4A18H0YCH9 400 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 TAAR5O14804 337 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 TSPAN15O95858 294 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 SCGB1D2O95969 90 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 IGKV3-11P04433 115 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 GALNSP34059 522 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 DAP3P51398 398 aaKnown RBP9.79□□□□□ -0.84
CCDC40-203ENST00000374877 GFERP55789 205 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 FOXK1P85037 733 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 TLE3Q04726 772 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF616Q08AN1 781 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 MS4A18Q3C1V0 323 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 TRIM61Q5EBN2 209 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 ZNF561Q8N587 486 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 KCNG3Q8TAE7 436 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 IP6K3Q96PC2 410 aa9.79□□□□□ -0.84
CCDC40-203ENST00000374877 RSRP1Q9BUV0 290 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms