RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GTF3AQ92664 365 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 PPP1R14AQ96A00 147 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 APOBEC3DQ96AK3 386 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 SGK3Q96BR1 496 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 DMRTB1Q96MA1 342 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 UCN2Q96RP3 112 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 SRXN1Q9BYN0 137 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 TTTY12Q9BZ98 90 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 PRRG4Q9BZD6 226 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 OR2H1Q9GZK4 316 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 RIMS4Q9H426 269 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 ZFP57Q9NU63 452 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 NKIRAS2Q9NYR9 191 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF224Q9NZL3 707 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 MGAT4CQ9UBM8 478 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 CGGBP1Q9UFW8 167 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 KCNN3Q9UGI6 736 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 PIGLQ9Y2B2 252 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 MAB21L2Q9Y586 359 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 HRH3Q9Y5N1 445 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 OR14I1A6ND48 311 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 FIGNL2A6NMB9 653 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 F5H5P2 479 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 MFNGO00587 321 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 RAMP1O60894 148 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 CRTAPO75718 401 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 DUS4LO95620 317 aaKnown RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 RLN1P04808 185 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 FREM3P0C091 2139 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 TMIGD3P0DMS9 266 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 SLC25A4P12235 298 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 CLDN18P56856 261 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 CXADRP78310 365 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 PLGLB1Q02325 96 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 UNC119Q13432 240 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF345Q14585 488 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 KIF26BQ2KJY2 2108 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 EIF2S3LQ2VIR3 472 aaKnown RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 CEACAM16Q2WEN9 425 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 ESCO2Q56NI9 601 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 NHLRC3Q5JS37 347 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 WIPI1Q5MNZ9 446 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 TCEAL6Q6IPX3 200 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 TEX261Q6UWH6 196 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 Q6ZS49 121 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 NUFIP2Q7Z417 695 aaKnown RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 FJX1Q86VR8 437 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 OR4K15Q8NH41 348 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 MITD1Q8WV92 249 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 TCEAL3Q969E4 200 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 APH1AQ96BI3 265 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 FBXO17Q96EF6 278 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 DNAJA3Q96EY1 480 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 BORCS8Q96FH0 119 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 REEP6Q96HR9 211 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 FAM71F1Q96KD3 344 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 C1orf147Q96MC9 270 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 SPACA1Q9HBV2 294 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 COMMD9Q9P000 198 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 FOXJ2Q9P0K8 574 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 EIF3KQ9UBQ5 218 aaKnown RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 ELF5Q9UKW6 265 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 U3KQ87 197 aa7.62□□□□□ -1.19
SNRNP40-202ENST00000373720 PCNX3Q9H6A9 2034 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 LOC101059948A0A1B0GTJ6 334 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 PLSCR5A0PG75 271 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 FOXI3A8MTJ6 420 aaPredicted RBP7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 SLC22A5O76082 557 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 OR2F2O95006 317 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 CST4P01036 141 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 NRASP01111 189 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 IGHG3P01860 377 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 HPXP02790 462 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 LCATP04180 440 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 MMP7P09237 267 aaPredicted RBP7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 RFPL3SP0C7P2 107 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF735P0CB33 412 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 PET100P0DJ07 73 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 RPA2P15927 270 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 ABOP16442 354 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 MGMTP16455 207 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF32P17041 273 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 FPR2P25090 351 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 MPGP29372 298 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 CALCRP30988 508 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 RAD52P43351 418 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 OR3A3P47888 321 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 OR3A2P47893 321 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 HTR5AP47898 357 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 MTCP1P56278 107 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 PER3P56645 1201 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 SEC61A1P61619 476 aaKnown RBP7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 RPS18P62269 152 aaKnown RBP7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 PSG4Q00888 419 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 MADCAM1Q13477 382 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 OR2F1Q13607 317 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 LPAL2Q16609 132 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 RSPO1Q2MKA7 263 aaPredicted RBP7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 ELP2Q6IA86 826 aa7.61□□□□□ -1.19
SNRNP40-202ENST00000373720 SPINK14Q6IE38 97 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms