RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 GLDNQ6ZMI3 551 aaPredicted RBP11.63□□□□□ -0.55
NCDN-203ENST00000373253 MRPL21Q7Z2W9 205 aaKnown RBP11.63□□□□□ -0.55
NCDN-203ENST00000373253 C1QL2Q7Z5L3 287 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 ZNF441Q8N8Z8 693 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 U3KQA8 63 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 PRAF2O60831 178 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 TRAPPC2P0DI81 140 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 TRAPPC2BP0DI82 140 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 PGA4P0DJD7 388 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 PGA3P0DJD8 388 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 SUMO3P55854 103 aaPredicted RBP11.63□□□□□ -0.55
NCDN-203ENST00000373253 CARFQ8N187 725 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 REEP6Q96HR9 211 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 PFDN2Q9UHV9 154 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 NUP50Q9UKX7 468 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 SESN1Q9Y6P5 492 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 CHD8Q9HCK8 2581 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 A0A0B4J2A0 478 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 IGFBP7Q16270 282 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 PDSS1Q5T2R2 415 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 CREB3L2Q70SY1 520 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 HAVCR2Q8TDQ0 301 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 FAAP24Q9BTP7 215 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 SHPKQ9UHJ6 478 aa11.63□□□□□ -0.55
NCDN-203ENST00000373253 A6NLC8 198 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 NAGAP17050 411 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 PPP1R1AQ13522 171 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 RAB12Q6IQ22 244 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 TUSC5Q8IXB3 177 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 C9orf62Q8N4C0 152 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 OR10R2Q8NGX6 335 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 LIPHQ8WWY8 451 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 CPNE2Q96FN4 548 aaPredicted RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 SGCZQ96LD1 299 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 PHB2Q99623 299 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 FOXB1Q99853 325 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 CMSS1Q9BQ75 279 aaKnown RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 MS4A7Q9GZW8 240 aaPredicted RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 NELFAQ9H3P2 528 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 KLK13Q9UKR3 277 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 MCTS1Q9ULC4 181 aaKnown RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 C14orf166Q9Y224 244 aaKnown RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 DSPP15924 2871 aaKnown RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 HSPA12AO43301 675 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 ADAP1O75689 374 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 MT-CO3P00414 261 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 RBMXP38159 391 aaKnown RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 LUMP51884 338 aaPredicted RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 DHRS2Q13268 280 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 SNAI3Q3KNW1 292 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 ELFN2Q5R3F8 820 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 ZNF684Q5T5D7 378 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 MRPL14Q6P1L8 145 aaKnown RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 BMPERQ8N8U9 685 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 SUMF1Q8NBK3 374 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 SEMA6DQ8NFY4 1073 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 OR10S1Q8NGN2 331 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 ZC3HAV1LQ96H79 300 aaKnown RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 CDC6Q99741 560 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 AQP7P3A6NL99 342 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 ANOS1P23352 680 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 RAP2BP61225 183 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 TSC22D1Q15714 1073 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 SLC25A26Q70HW3 274 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 DOK3Q7L591 496 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 ZGRF1Q86YA3 2104 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 OR6X1Q8NH79 312 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 FBXW5Q969U6 566 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 FOXRED1Q96CU9 486 aaPredicted RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 GPHA2Q96T91 129 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 PRRT1Q99946 306 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 ZNF629Q9UEG4 869 aaPredicted RBP11.62□□□□□ -0.55
NCDN-203ENST00000373253 KCNK7Q9Y2U2 307 aa11.62□□□□□ -0.55
NCDN-203ENST00000373253 FBXO24O75426 580 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 FGF5P12034 268 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 SUCLG1P53597 346 aaKnown RBP11.61□□□□□ -0.55
NCDN-203ENST00000373253 HACD4Q5VWC8 232 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 ADAD2Q8NCV1 583 aaKnown RBP11.61□□□□□ -0.55
NCDN-203ENST00000373253 ESRP2Q9H6T0 727 aaKnown RBP11.61□□□□□ -0.55
NCDN-203ENST00000373253 GAAP10253 952 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 GLRA1P23415 457 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 MMP16P51512 607 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 PPIAP62937 165 aaKnown RBP11.61□□□□□ -0.55
NCDN-203ENST00000373253 RAC1P63000 192 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 TSPO2Q5TGU0 170 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 CLEC9AQ6UXN8 241 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 GTPBP8Q8N3Z3 284 aaPredicted RBP11.61□□□□□ -0.55
NCDN-203ENST00000373253 ZNF611Q8N823 705 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 OR51F2Q8NH61 342 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 SIGLEC12Q96PQ1 595 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 PPA2Q9H2U2 334 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 TAS2R3Q9NYW6 316 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 TRBV5-7A0A0A0MS05 114 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 TRAV39A0A0B4J263 110 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 A0A1B0GUH1 482 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 HS3ST1O14792 307 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 PPP3CBP16298 524 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 ZP1P60852 638 aa11.61□□□□□ -0.55
NCDN-203ENST00000373253 ARF1P84077 181 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms