RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ZNF600Q6ZNG1 722 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 GPRIN1Q7Z2K8 1008 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 NAA60Q9H7X0 242 aa13.9□□□□□ -0.18
GTF3C4-201ENST00000372146 POLR2AP24928 1970 aaKnown RBP13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 UTS2O95399 124 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 CRHP06850 196 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 EPHA2P29317 976 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 TRAT1Q6PIZ9 186 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 AAED1Q7RTV5 226 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 WDR31Q8NA23 367 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 NEURL3Q96EH8 262 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 NAT8Q9UHE5 227 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 NPTNQ9Y639 398 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 B4DEV8 164 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 GALR3O60755 368 aaPredicted RBP13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 GPANK1O95872 356 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 OPRK1P41145 380 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 POM121L2Q96KW2 1035 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 SPTA1P02549 2419 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 PEX10O60683 326 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 RBP4P02753 201 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 C21orf58P58505 322 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 MOB3AQ96BX8 217 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 LOC389332A0A1B0GUA5 103 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 SP1P08047 785 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 SLC6A1P30531 599 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 MRPS24Q96EL2 167 aaKnown RBP13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 SPTBN2O15020 2390 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 ZNF253O75346 499 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 POU3F3P20264 500 aaPredicted RBP13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 BSGP35613 385 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 LSRQ86X29 649 aaPredicted RBP13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 OIT3Q8WWZ8 545 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 A0A0U1RQS6 177 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 PSMB5P28074 263 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 PTRH1Q86Y79 214 aaKnown RBP13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 MIEN1Q9BRT3 115 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 CNTD2Q9H8S5 307 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 UQCC1Q9NVA1 299 aa13.89□□□□□ -0.19
GTF3C4-201ENST00000372146 C5orf46Q6UWT4 87 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 CLEC14AQ86T13 490 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 KIR2DS3Q14952 304 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 ST3GAL2Q16842 350 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 MANEAQ5SRI9 462 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 CACFD1Q9UGQ2 172 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 MED25Q71SY5 747 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 CD14P08571 375 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 WNT3P56703 355 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 PNRC1Q12796 327 aaPredicted RBP13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 RBM45Q8IUH3 476 aaKnown RBP13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 RTL8AQ9BWD3 113 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 C11orf68Q9H3H3 251 aaKnown RBP13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 HEATR5AQ86XA9 2040 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 MBLAC1A4D2B0 266 aaPredicted RBP13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 SERINC4A6NH21 518 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 ZFAND5O76080 213 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 PRAMEF20Q5VT98 475 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 PAQR6Q6TCH4 344 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 OR51E1Q8TCB6 317 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 ZNF583Q96ND8 569 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 ISG20L2Q9H9L3 353 aaKnown RBP13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 FBXO4Q9UKT5 387 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 TDRD15B5MCY1 1934 aaKnown RBP13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 ZNF646O15015 1829 aaPredicted RBP13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 CRYBA1P05813 215 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 FAM71E1Q6IPT2 247 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 C12orf54Q6X4T0 127 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 TMEM136Q6ZRR5 245 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 MISP3Q96FF7 219 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 MEIKINA0A087WXM9 373 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 FZD9O00144 591 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 CSF2RAP15509 400 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 EGLN2Q96KS0 407 aa13.88□□□□□ -0.19
GTF3C4-201ENST00000372146 PITX1P78337 314 aaPredicted RBP13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 DOLPP1Q86YN1 238 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 ARFGAP1Q8N6T3 406 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 KLRG1Q96E93 195 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 SPATA6Q9NWH7 488 aaPredicted RBP13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 PIAS3Q9Y6X2 628 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 TCL1AP56279 114 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 DGAT2L7PQ6IED9 249 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 GALMQ96C23 342 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 ZC3HAV1LQ96H79 300 aaKnown RBP13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 CDCA4Q9BXL8 241 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 COA3Q9Y2R0 106 aaPredicted RBP13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 IGHV3-64DA0A0J9YX35 117 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 CA12O43570 354 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 AVPR2P30518 371 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 RBM11P57052 281 aaKnown RBP13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 DMRTA1Q5VZB9 504 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 BOD1Q96IK1 185 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 ICAM5Q9UMF0 924 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 PPM1DO15297 605 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 TEX30Q5JUR7 227 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 LAIR1Q6GTX8 287 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 OR52E1Q8NGJ3 308 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 NEURL2Q9BR09 285 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 PRR14Q9BWN1 585 aa13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
GTF3C4-201ENST00000372146 FURINP09958 794 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms