RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 C1QL3Q5VWW1 255 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 DERL3Q96Q80 235 aa13.14□□□□□ -0.31
NDC1-201ENST00000371429 SERPINE3A8MV23 424 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 OPCMLQ14982 345 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 TAAR3PQ9P1P4 343 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 LRRC37AA6NMS7 1700 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 ZIC2O95409 532 aaPredicted RBP13.13□□□□□ -0.31
NDC1-201ENST00000371429 MLF1P58340 268 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 PRDX4Q13162 271 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 THSD4Q6ZMP0 1018 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 RAB1CQ92928 201 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 CMBLQ96DG6 245 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 TINAGL1Q9GZM7 467 aaPredicted RBP13.13□□□□□ -0.31
NDC1-201ENST00000371429 LIPT2A6NK58 231 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 POM121CA8CG34 1229 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 CCL21O00585 134 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 CRYBA1P05813 215 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 TBPP20226 339 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 HRH1P35367 487 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 THNSL2Q86YJ6 484 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 CELF2-AS1Q8N7Q2 184 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 OR13C8Q8NGS7 320 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 PINX1Q96BK5 328 aaKnown RBP13.13□□□□□ -0.31
NDC1-201ENST00000371429 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 AMDHD2Q9Y303 409 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 EPXP11678 715 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 SPANXN5Q5MJ07 72 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 TMEM268Q5VZI3 342 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
NDC1-201ENST00000371429 TMEFF2Q9UIK5 374 aaPredicted RBP13.13□□□□□ -0.31
NDC1-201ENST00000371429 RIF1Q5UIP0 2472 aaKnown RBP13.12□□□□□ -0.31
NDC1-201ENST00000371429 SMIM18P0DKX4 95 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 CD1EP15812 388 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 LYSMD2Q8IV50 215 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 CORO2AQ92828 525 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 CDX4O14627 284 aaPredicted RBP13.12□□□□□ -0.31
NDC1-201ENST00000371429 HMGA2P52926 109 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 KISS1Q15726 138 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 C4orf45Q96LM5 186 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 TRAV1-2A0A0B4J238 106 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 CD3DP04234 171 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 FOXL2P58012 376 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 C9orf40Q8IXQ3 194 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 LAMP3Q9UQV4 416 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 TUBAL3A6NHL2 446 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 K7EQM0 130 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 NKX2-8O15522 239 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 NGFP01138 241 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 HPNP05981 417 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 CYC1P08574 325 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 ADRA2CP18825 462 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 TESK1Q15569 626 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 FAM58AQ8N1B3 248 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 NPEPL1Q8NDH3 523 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 LRRC29Q8WV35 223 aa13.12□□□□□ -0.31
NDC1-201ENST00000371429 FYTTD1Q96QD9 318 aaKnown RBP13.12□□□□□ -0.31
NDC1-201ENST00000371429 GPR37O15354 613 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 SRP14P37108 136 aaKnown RBP13.11□□□□□ -0.31
NDC1-201ENST00000371429 USF2Q15853 346 aaPredicted RBP13.11□□□□□ -0.31
NDC1-201ENST00000371429 ATG4DQ86TL0 474 aaPredicted RBP13.11□□□□□ -0.31
NDC1-201ENST00000371429 SLC7A6Q92536 515 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 AQP7O14520 342 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 CDC42EP2O14613 210 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 EVX1P49640 407 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 FAM74A1Q5RGS3 127 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 TMEM52Q8NDY8 209 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 GPX8Q8TED1 209 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 C19orf12Q9NSK7 152 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 SNRNP70P08621 437 aaKnown RBP13.11□□□□□ -0.31
NDC1-201ENST00000371429 LIFP15018 202 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
NDC1-201ENST00000371429 LINC00299Q6ZSB3 139 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 GINS3Q9BRX5 216 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 PTDSS2Q9BVG9 487 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 DDA1Q9BW61 102 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 NCBP2LA6PVI3 153 aaKnown RBP13.11□□□□□ -0.31
NDC1-201ENST00000371429 GMDSO60547 372 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 PPT1P50897 306 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 BAMBIQ13145 260 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 PDCD1Q15116 288 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 ZAR1Q86SH2 424 aa13.11□□□□□ -0.31
NDC1-201ENST00000371429 RTN4IP1Q8WWV3 396 aaPredicted RBP13.11□□□□□ -0.31
NDC1-201ENST00000371429 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 C3orf80F5H4A9 247 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 MPZL1O95297 269 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 TGFBR1P36897 503 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 UBALD1Q8TB05 177 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 MARCH1Q8TCQ1 289 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 ABHD3Q8WU67 409 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 GON7Q9BXV9 100 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 ZFPL1O95159 310 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 CD96P40200 585 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 NPBWR1P48145 328 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 TMPRSS3P57727 454 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 BTG1P62324 171 aa13.1□□□□□ -0.31
NDC1-201ENST00000371429 SLC25A35Q3KQZ1 300 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms