RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PRSS27Q9BQR3 290 aa8.12□□□□□ -1.11
SMARCA1-202ENST00000371122 MED18Q9BUE0 208 aa8.12□□□□□ -1.11
SMARCA1-202ENST00000371122 SLC19A3Q9BZV2 496 aa8.12□□□□□ -1.11
SMARCA1-202ENST00000371122 PRO3102Q9H379 93 aa8.12□□□□□ -1.11
SMARCA1-202ENST00000371122 AKIRIN1Q9H9L7 192 aaPredicted RBP8.12□□□□□ -1.11
SMARCA1-202ENST00000371122 TAF9BQ9HBM6 251 aa8.12□□□□□ -1.11
SMARCA1-202ENST00000371122 TREM2Q9NZC2 230 aa8.12□□□□□ -1.11
SMARCA1-202ENST00000371122 MYO18BQ8IUG5 2567 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SPTBN5Q9NRC6 3674 aaKnown RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 MEIKINA0A087WXM9 373 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 LILRA5A6NI73 299 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 DEGS1O15121 323 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 MPPED1O15442 326 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SOCS1O15524 211 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SSSCA1O60232 199 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 CTAG2O75638 210 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 GLSO94925 669 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 PDGFBP01127 241 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 NGFRP08138 427 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 ZNF32P17041 273 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 UBE2KP61086 200 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 PPIAP62937 165 aaKnown RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 RPS27AP62979 156 aaKnown RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 UBA52P62987 128 aaKnown RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 EGR3Q06889 387 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 DHRS2Q13268 280 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 OR2T2Q6IF00 324 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 ZFP62Q8NB50 900 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SLC38A9Q8NBW4 561 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 PLPP5Q8NEB5 264 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 RTN4IP1Q8WWV3 396 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 MCHR2Q969V1 340 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 MUCL1Q96DR8 90 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 MVB12AQ96EY5 273 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 MS4A7Q9GZW8 240 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 ISYNA1Q9NPH2 558 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 FAM96BQ9Y3D0 163 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 C5orf42Q9H799 3197 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SHISA3A0PJX4 238 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 ONECUT2O95948 504 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 EIF2S3P41091 472 aaKnown RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 MMP15P51511 669 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SPEM2Q0P670 501 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 KISS1Q15726 138 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 DEFB109BQ30KR1 87 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 DMKNQ6E0U4 476 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 TEX261Q6UWH6 196 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 RABEPKQ7Z6M1 372 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 ADGRG3Q86Y34 549 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 PRSS35Q8N3Z0 413 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 OR2G3Q8NGZ4 309 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 C14orf79Q96F83 325 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 BCO1Q9HAY6 547 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 DYNLRB1Q9NP97 96 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 U3KQ87 197 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 DEFB108AA8MXU0 73 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 ALG1L2C9J202 215 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SHOXO15266 292 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 TBX19O60806 448 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 GIPP09681 153 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 ACSM4P0C7M7 580 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 GPR3P46089 330 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 NXPH1P58417 271 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 ERVK-16P61578 105 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 GRB2P62993 217 aaKnown RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 PDLIM3Q53GG5 364 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 C5orf46Q6UWT4 87 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SVBPQ8N300 66 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 NECAP1Q8NC96 275 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 OR8U1Q8NH10 309 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SLC25A43Q8WUT9 341 aaPredicted RBP8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 RNF141Q8WVD5 230 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 GPHA2Q96T91 129 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 SARGQ9BW04 601 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 PILRAQ9UKJ1 303 aa8.11□□□□□ -1.11
SMARCA1-202ENST00000371122 RALGAPA1Q6GYQ0 2036 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 OR2M5A3KFT3 312 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 ZNF732B4DXR9 585 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 ANKRD34CP0C6C1 535 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 PMP22Q01453 160 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 SLC10A1Q14973 349 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 OR8B8Q15620 311 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 EXT1Q16394 746 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 GSG1Q2KHT4 349 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 ARSJQ5FYB0 599 aaPredicted RBP8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 Q6ZRG5 221 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 ANKRD37Q7Z713 158 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 C9orf40Q8IXQ3 194 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 SCARB1Q8WTV0 552 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 MARC2Q969Z3 335 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 SEH1LQ96EE3 360 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 RASL10BQ96S79 203 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 A0A087WV48 116 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 TRAV1-2A0A0B4J238 106 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 CCL3P10147 92 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 NDUFB7P17568 137 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 RAB11AP62491 216 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 RAB1AP62820 205 aa8.1□□□□□ -1.11
SMARCA1-202ENST00000371122 SPINK9Q5DT21 86 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms