RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SNX11Q9Y5W9 270 aa3.37□□□□□ -1.87
MCF2-203ENST00000370576 C5orf42Q9H799 3197 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 IGHV5-10-1A0A0J9YXX1 117 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 A0A1W2PNU3 283 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 A0A1W2PRD5 423 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 LRRC30A6NM36 301 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 CDX4O14627 284 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 CHEK1O14757 476 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 FCN3O75636 299 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 AGFG2O95081 481 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 HLA-DQB1P01920 261 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ORM1P02763 201 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 DBIP07108 87 aaKnown RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 ADRB1P08588 477 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ASAH2BP0C7U1 165 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ZNF12P17014 697 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 CERS1P27544 350 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 HTR2CP28335 458 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 MNDAP41218 407 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 KIR2DL3P43628 341 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 CXCL12P48061 93 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 MAPK12P53778 367 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 RAP1BP61224 184 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 EWSR1Q01844 656 aaKnown RBP eCLIP3.36□□□□□ -1.87
MCF2-203ENST00000370576 MLLT11Q13015 90 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 SRSF6Q13247 344 aaKnown RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 DUSP7Q16829 419 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ZNF791Q3KP31 576 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 ZNF672Q499Z4 452 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 LIN52Q52LA3 116 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ASPHD1Q5U4P2 390 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 DPY19L4Q7Z388 723 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 OR2W3Q7Z3T1 314 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ZNF440Q8IYI8 595 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 RYBPQ8N488 228 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 GJC3Q8NFK1 279 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 TSTD1Q8NFU3 115 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ZNF524Q96C55 264 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 TMEM19Q96HH6 336 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 WFIKKN1Q96NZ8 548 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 COPS4Q9BT78 406 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 LHPPQ9H008 270 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 RNF122Q9H9V4 155 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 STEAP1Q9UHE8 339 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 MOKQ9UQ07 419 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ANGPT4Q9Y264 503 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 PEX16Q9Y5Y5 336 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 KCNE3Q9Y6H6 103 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 V9GYQ6 96 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 K7EN84 100 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 CDIPTO14735 213 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 KCNK2O95069 426 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 HAND1O96004 215 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 WNT2P09544 360 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ZNF806P0C7X5 589 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ETFAP13804 333 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 GYPEP15421 78 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 AK4P27144 223 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 RPL5P46777 297 aaKnown RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 RAB13P51153 203 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 SLC25A1P53007 311 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 GP2P55259 537 aaKnown RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 RPL32P62910 135 aaKnown RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 RGS1Q08116 209 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 ILF3Q12906 894 aaKnown RBP eCLIP3.36□□□□□ -1.87
MCF2-203ENST00000370576 GUSBP1Q15486 140 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 RPL13AP3Q6NVV1 102 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 LEG1Q6P5S2 330 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 TEPPQ6URK8 271 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 PQLC2Q6ZP29 291 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 LRRC28Q86X40 367 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 ARRDC1Q8N5I2 433 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 OR1L3Q8NH93 324 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 SSC4DQ8WTU2 575 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 TSACCQ96A04 125 aaPredicted RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 PPWD1Q96BP3 646 aaKnown RBP3.36□□□□□ -1.87
MCF2-203ENST00000370576 IL4I1Q96RQ9 567 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 CCDC3Q9BQI4 270 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 C5orf66Q9H5L9 145 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 NOX4Q9NPH5 578 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 SIT1Q9Y3P8 196 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 TECTAO75443 2155 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 SCN3AQ9NY46 2000 aa3.36□□□□□ -1.87
MCF2-203ENST00000370576 LOC100130705A0A1B0GUX0 176 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 A0A1W2PP11 408 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 FAM157AC9JC47 383 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 M0R082 166 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 OVOL3O00110 214 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 GNB5O14775 395 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 CHP2O43745 196 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 EIF4E2O60573 245 aaKnown RBP3.35□□□□□ -1.87
MCF2-203ENST00000370576 KLF7O75840 302 aaPredicted RBP3.35□□□□□ -1.87
MCF2-203ENST00000370576 WDPCPO95876 746 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 HIST1H1CP16403 213 aaKnown RBP3.35□□□□□ -1.87
MCF2-203ENST00000370576 RAG2P55895 527 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 PPP1CAP62136 330 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 HPCAP84074 193 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 AESQ08117 197 aa3.35□□□□□ -1.87
MCF2-203ENST00000370576 EXOSC2Q13868 293 aaKnown RBP3.35□□□□□ -1.87
MCF2-203ENST00000370576 ARL6IP1Q15041 203 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms