RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 ARPC2O15144 300 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 TRMUO75648 421 aaKnown RBP8.19□□□□□ -1.1
TUBE1-201ENST00000368657 SLC2A10O95528 541 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 HLA-DPB1P04440 258 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 H1F0P07305 194 aaKnown RBP8.19□□□□□ -1.1
TUBE1-201ENST00000368657 GUCA1AP43080 201 aaPredicted RBP8.19□□□□□ -1.1
TUBE1-201ENST00000368657 CEBPDP49716 269 aaPredicted RBP8.19□□□□□ -1.1
TUBE1-201ENST00000368657 DYNLT3P51808 116 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 CTXN1P60606 82 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 PRKCDQ05655 676 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 FMODQ06828 376 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 ZNF260Q3ZCT1 412 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 LRRC10Q5BKY1 277 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 MBOAT2Q6ZWT7 520 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 FGFRL1Q8N441 504 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 MCUR1Q96AQ8 359 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 MALSU1Q96EH3 234 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 FAM46AQ96IP4 442 aaKnown RBP8.19□□□□□ -1.1
TUBE1-201ENST00000368657 NSMCE2Q96MF7 247 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 WACQ9BTA9 647 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 TXNIPQ9H3M7 391 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 SMURF2Q9HAU4 748 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 TPSG1Q9NRR2 321 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 FRRS1LQ9P0K9 344 aa8.19□□□□□ -1.1
TUBE1-201ENST00000368657 STX18Q9P2W9 335 aaKnown RBP8.19□□□□□ -1.1
TUBE1-201ENST00000368657 TRBV4-1A0A0J9YWV2 114 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 FAM90A8PA6NJQ4 464 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 A8MZ25 164 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 H0YAE9 185 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 HSD17B1P14061 328 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 MUC1P15941 1255 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 RHCEP18577 417 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 CNTFRP26992 372 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 SLC9A3P48764 834 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 RPL27P61353 136 aaKnown RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 HOXA4Q00056 320 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 SPIBQ01892 262 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 MICBQ29980 383 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 PRAMEF6Q5VXH4 476 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 CYP2R1Q6VVX0 501 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 C16orf82Q7Z2V1 217 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 TSEN54Q7Z6J9 526 aaKnown RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 ZNF695Q8IW36 515 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 RNF113BQ8IZP6 322 aaKnown RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 LIPHQ8WWY8 451 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 H1FXQ92522 213 aaKnown RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 HDAC2Q92769 488 aaKnown RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 RNFT2Q96EX2 444 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 PYURFQ96I23 114 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 NSL1Q96IY1 281 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 AKR1E2Q96JD6 320 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 SEPHS2Q99611 448 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 CCL13Q99616 98 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 NDEL1Q9GZM8 345 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 GORASP2Q9H8Y8 452 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 KRCC1Q9NPI7 259 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 NDUFAF4Q9P032 175 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 CD300AQ9UGN4 299 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 AURKCQ9UQB9 309 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 TMEM5Q9Y2B1 443 aa8.18□□□□□ -1.1
TUBE1-201ENST00000368657 NOP16Q9Y3C1 178 aaKnown RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 SIRT4Q9Y6E7 314 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-201ENST00000368657 A0A1W2PPL8 197 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 A0A1W2PRQ8 180 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 PSMB11A5LHX3 300 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 HTR3EA5X5Y0 456 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 H7C1C5 153 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 CDC42EP2O14613 210 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 GADD45GO95257 159 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 PTBP3O95758 552 aaKnown RBP8.17□□□□□ -1.1
TUBE1-201ENST00000368657 FABP3P05413 133 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 NR2C1P13056 603 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 LAP3P28838 519 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 GGT2P36268 569 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 TGM4P49221 684 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 LCN6P62502 163 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 DGCR6Q14129 220 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 SEC23BQ15437 767 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 ZBED5Q49AG3 693 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 ARMC4Q5T2S8 1044 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 C18orf65Q6ZTR6 163 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 BHLHE23Q8NDY6 225 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 FOXRED1Q96CU9 486 aaPredicted RBP8.17□□□□□ -1.1
TUBE1-201ENST00000368657 DUS3LQ96G46 650 aaKnown RBP8.17□□□□□ -1.1
TUBE1-201ENST00000368657 C7orf34Q96L11 122 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 RBP7Q96R05 134 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 ST6GALNAC5Q9BVH7 336 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 ANKRD19PQ9H560 264 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 RERGLQ9H628 205 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 PTTG3PQ9NZH4 202 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 GRHPRQ9UBQ7 328 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 ADAM18Q9Y3Q7 739 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 UGT2A1Q9Y4X1 527 aa8.17□□□□□ -1.1
TUBE1-201ENST00000368657 PKHD1P08F94 4074 aa8.16□□□□□ -1.1
TUBE1-201ENST00000368657 A0A1W2PQ09 198 aa8.16□□□□□ -1.1
TUBE1-201ENST00000368657 UNC119BA6NIH7 251 aa8.16□□□□□ -1.1
TUBE1-201ENST00000368657 A6NIZ1 184 aa8.16□□□□□ -1.1
TUBE1-201ENST00000368657 C12orf71A8MTZ7 269 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms