RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CXCL3P19876 107 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 C4BPBP20851 252 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 DNASE1P24855 282 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 RIDAP52758 137 aaKnown RBP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 PABPC1L2AQ5JQF8 200 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 ELFN2Q5R3F8 820 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 ANKRD16Q6P6B7 361 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 ABHD12BQ7Z5M8 362 aaPredicted RBP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 FJX1Q86VR8 437 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 MS4A3Q96HJ5 214 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 ZFP3Q96NJ6 502 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 VKORC1Q9BQB6 163 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 SFXN3Q9BWM7 321 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 DLL4Q9NR61 685 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 F5H5K5 113 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 CCL21O00585 134 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 ARL6IP5O75915 188 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 FARS2O95363 451 aaKnown RBP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 CD3GP09693 182 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 TACSTD2P09758 323 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 GDI2P50395 445 aaKnown RBP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 RAB14P61106 215 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 RPS11P62280 158 aaKnown RBP eCLIP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 FLI1Q01543 452 aaPredicted RBP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 SNTB2Q13425 540 aaKnown RBP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 ALKBH1Q13686 389 aaKnown RBP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 CDSNQ15517 529 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 SLC25A35Q3KQZ1 300 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 NRN1LQ496H8 165 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 FAM27D1Q5T7N8 215 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 C22orf34Q6ZV56 151 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.63□□□□□ -0.71
CAPN9-203ENST00000366666 ZNF584Q8IVC4 421 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 OR51A4Q8NGJ6 313 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 RPS4Y2Q8TD47 263 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 SMIM19Q96E16 107 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 G6PC2Q9NQR9 355 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 FAM206AQ9NX38 181 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 CHD6Q8TD26 2715 aa10.63□□□□□ -0.71
CAPN9-203ENST00000366666 TMEM269A0A1B0GVZ9 245 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 A6NIN4 97 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 OR4C45A6NMZ5 311 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 A8MXE2 369 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 TMEM127O75204 238 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 CNOT4O95628 575 aaKnown RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 CD1AP06126 327 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 RAB1AP62820 205 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 TLE1Q04724 770 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 FAM27E3Q08E93 113 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 EXOSC2Q13868 293 aaKnown RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 KLF9Q13886 244 aaPredicted RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 RPL22L1Q6P5R6 122 aaKnown RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 STAC2Q6ZMT1 411 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 OVCH2Q7RTZ1 564 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 ORAI1Q96D31 301 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 C4orf45Q96LM5 186 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 ZNF75AQ96N20 296 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 DPCDQ9BVM2 203 aaPredicted RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 C1QTNF6Q9BXI9 259 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 KIF25Q9UIL4 384 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 SPATA2Q9UM82 520 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 TIMM10BQ9Y5J6 103 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 LOC100509620A0A075B734 347 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 OR6C6A6NF89 314 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 NAP1L6A6NFF2 107 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 HSPB2A8KAH6 182 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 SSNA1O43805 119 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 GATBO75879 557 aaKnown RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 AGFG2O95081 481 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 CELA3BP08861 270 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 EPXP11678 715 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 CRYGSP22914 178 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 HSD11B1P28845 292 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 CX3CR1P49238 355 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 HOXA1P49639 335 aaPredicted RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 ZNF81P51508 661 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 ZNF121P58317 390 aaPredicted RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 DGCR2P98153 550 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 TAF13Q15543 124 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 HSPB2Q16082 182 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 DEGS2Q6QHC5 323 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 MDP1Q86V88 176 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 CATSPERDQ86XM0 798 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 PIAS4Q8N2W9 510 aaPredicted RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 WDR31Q8NA23 367 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 UXS1Q8NBZ7 420 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 SMIM4Q8WVI0 70 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 PHYHIPQ92561 330 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 RND1Q92730 232 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 MRPL48Q96GC5 212 aaKnown RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 SOX7Q9BT81 388 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 ZNF436Q9C0F3 470 aaPredicted RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 PLEKHA1Q9HB21 404 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 ZNF629Q9UEG4 869 aaPredicted RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 RALYQ9UKM9 306 aaKnown RBP10.62□□□□□ -0.71
CAPN9-203ENST00000366666 MAB21L2Q9Y586 359 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 R4GMQ9 66 aa10.62□□□□□ -0.71
CAPN9-203ENST00000366666 FLNCQ14315 2725 aa10.61□□□□□ -0.71
CAPN9-203ENST00000366666 HEATR1Q9H583 2144 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms