RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 UBBP0CG47 229 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 CNR1P21554 472 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 RPS27AP62979 156 aaKnown RBP19.82■□□□□ 0.76
LDB1-201ENST00000361198 UBA52P62987 128 aaKnown RBP19.82■□□□□ 0.76
LDB1-201ENST00000361198 LIN54Q6MZP7 749 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 DHRS13Q6UX07 377 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 C17orf107Q6ZR85 190 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 DTX1Q86Y01 620 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 KCNRGQ8N5I3 272 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 PCNX2A6NKB5 2137 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 TMEM14DPA8MWL7 114 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 TERTO14746 1132 aaKnown RBP19.82■□□□□ 0.76
LDB1-201ENST00000361198 IGLV3-1P01715 115 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 DBHP09172 617 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 GSK3AP49840 483 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 MRPS34P82930 218 aaKnown RBP19.82■□□□□ 0.76
LDB1-201ENST00000361198 CDNFQ49AH0 187 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 FAM27BQ5VT28 67 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 LYG2Q86SG7 212 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 CD163Q86VB7 1156 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 ZNF101Q8IZC7 436 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 CHST4Q8NCG5 386 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 OR2V1Q8NHB1 315 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 ST8SIA2Q92186 375 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 GPR87Q9BY21 358 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 PLEK2Q9NYT0 353 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 TNFSF18Q9UNG2 199 aa19.82■□□□□ 0.76
LDB1-201ENST00000361198 MED13Q9UHV7 2174 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 IGKV1-9A0A0C4DH69 117 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 SCGNO76038 276 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 OR2F2O95006 317 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 PRKACBP22694 351 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 OTX1P32242 354 aaPredicted RBP19.81■□□□□ 0.76
LDB1-201ENST00000361198 OR3A4PP47883 348 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 OR2F1Q13607 317 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 NKPD1Q17RQ9 610 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 C11orf87Q6NUJ2 197 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 GLIPR1L1Q6UWM5 242 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 TRAPPC6BQ86SZ2 158 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 CRLF2Q9HC73 371 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 NOP16Q9Y3C1 178 aaKnown RBP19.81■□□□□ 0.76
LDB1-201ENST00000361198 MRPS18CQ9Y3D5 142 aaKnown RBP19.81■□□□□ 0.76
LDB1-201ENST00000361198 NEURL1O76050 574 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 HCKP08631 526 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 GFRA1P56159 465 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 JMJD6Q6NYC1 403 aaPredicted RBP19.81■□□□□ 0.76
LDB1-201ENST00000361198 FAHD2BQ6P2I3 314 aaPredicted RBP19.81■□□□□ 0.76
LDB1-201ENST00000361198 LHFPL5Q8TAF8 219 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 MITD1Q8WV92 249 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 FAHD2AQ96GK7 314 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 C1orf147Q96MC9 270 aaPredicted RBP19.81■□□□□ 0.76
LDB1-201ENST00000361198 SIGLEC12Q96PQ1 595 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 GLS2Q9UI32 602 aa19.81■□□□□ 0.76
LDB1-201ENST00000361198 MRPS28Q9Y2Q9 187 aaKnown RBP19.81■□□□□ 0.76
LDB1-201ENST00000361198 C21orf140B9A014 251 aa19.8■□□□□ 0.76
LDB1-201ENST00000361198 RSPO4Q2I0M5 234 aaPredicted RBP19.8■□□□□ 0.76
LDB1-201ENST00000361198 TMEM104Q8NE00 496 aa19.8■□□□□ 0.76
LDB1-201ENST00000361198 NICN1Q9BSH3 213 aa19.8■□□□□ 0.76
LDB1-201ENST00000361198 CST11Q9H112 138 aa19.8■□□□□ 0.76
LDB1-201ENST00000361198 RASL12Q9NYN1 266 aa19.8■□□□□ 0.76
LDB1-201ENST00000361198 M0R135 149 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 CSN2P05814 226 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 RFC3P40938 356 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 ABLIM2Q6H8Q1 611 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 RTN4RL2Q86UN3 420 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 GVQW1Q8N7I0 195 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 ZNF799Q96GE5 643 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 ZNF845Q96IR2 970 aaPredicted RBP19.79■□□□□ 0.76
LDB1-201ENST00000361198 ALKBH3Q96Q83 286 aaPredicted RBP19.79■□□□□ 0.76
LDB1-201ENST00000361198 DNTTIP1Q9H147 329 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 CACNA1HO95180 2353 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 A0A0U1RQV5 110 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 LGALS8O00214 317 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 GNB3P16520 340 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 TBPP20226 339 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 PPP1R1AQ13522 171 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 AAED1Q7RTV5 226 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 SSC4DQ8WTU2 575 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 HES7Q9BYE0 225 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 WDR13Q9H1Z4 485 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 GPR160Q9UJ42 338 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 BOKQ9UMX3 212 aaPredicted RBP19.79■□□□□ 0.76
LDB1-201ENST00000361198 PLEKHA6Q9Y2H5 1048 aa19.79■□□□□ 0.76
LDB1-201ENST00000361198 C9orf170A2RU37 121 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 EIF3IQ13347 325 aaKnown RBP19.78■□□□□ 0.76
LDB1-201ENST00000361198 ABHD17BQ5VST6 288 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 OR52W1Q6IF63 320 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 TFAP2EQ6VUC0 442 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 NUDCD2Q8WVJ2 157 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 SELENOIQ9C0D9 397 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 LPAR5Q9H1C0 372 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 COMMD9Q9P000 198 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 DCAF10Q5QP82 559 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 GPR137CQ8N3F9 429 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 PXT1Q8NFP0 134 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 OR10R2Q8NGX6 335 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 ADAMTS17Q8TE56 1095 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 PPP1R1CQ8WVI7 109 aa19.78■□□□□ 0.76
LDB1-201ENST00000361198 A0A0A6YYD4 124 aa19.77■□□□□ 0.76
LDB1-201ENST00000361198 A0A1W2PP11 408 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms